myRT

myRT report for GCA_002517865.1_ASM251786v1

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Seq: NOBL01000006.1 Escherichia coli strain MOD1-EC5829 MOD1-EC5829_6_length_192780_cov_100.58, whole genome shotgun sequence (192780 bp)
Overview 1 RT 1: 79321-84797 bp Neighborhood of RT #1 [79321, 84841] Prim_Zn_Ribbon COG3378 RVT-Retrons TIR_2 Pox_D5 COG3943 Feature: gene Location: 79321-81654 bp Feature: domain Description: Prim_Zn_Ribbon Location: 79411-79519 bp Feature: domain Description: Prim_Zn_Ribbon Location: 7941 1 -7951 9 bp Feature: domain Description: COG3378 Location: 80128-81643 bp Feature: domain Description: COG3378 Location: 801 28-81 643 bp Feature: gene Location: 81931-82065 bp Feature: gene Location: 82241-83872 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 82556-83153 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 82556-831 53 bp Feature: domain Description: TIR_2 Location: 83477-83834 bp Feature: domain Description: TIR_2 Location: 83477-83834 bp Feature: gene Location: 84110-84262 bp Feature: domain Description: Pox_D5 Location: 84113-84236 bp Feature: domain Description: Pox_D5 Location: 841 1 3-84236 bp Feature: gene Location: 84548-84841 bp Feature: domain Description: COG3943 Location: 84662-84797 bp Feature: domain Description: COG3943 Location: 84662-84797 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase ), RVT-Retrons, TIR_2 (pfam13676), Pox_D5 (pfam03288), COG3943 (Uncharacterized conserved protein )