myRT

myRT report for GCA_002517965.1_ASM251796v1

Download annotations/find similar RTs

Seq: NOCJ01000032.1 Escherichia coli strain MOD1-EC5799 MOD1-EC5799_32_length_50270_cov_46.5829, whole genome shotgun sequence (50270 bp)
Overview 1 RT 1: 18194-22777 bp Neighborhood of RT #1 [18194, 23040] RVT-GII Inovirus_Gp2 DUF3987 Feature: gene Location: 18194-18367 bp Feature: gene Location: 18401-18709 bp Feature: gene Location: 18696-19859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18810-19497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 881 0-1 9497 bp Feature: gene Location: 20185-20748 bp Feature: domain Description: Inovirus_Gp2 Location: 20242-20683 bp Feature: domain Description: Inovirus_Gp2 Location: 20242-20683 bp Feature: gene Location: 21607-23040 bp Feature: domain Description: DUF3987 Location: 21700-22777 bp Feature: domain Description: DUF3987 Location: 21 700-22777 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Inovirus_Gp2 (pfam11726), DUF3987 (pfam13148)

Seq: NOCJ01000003.1 Escherichia coli strain MOD1-EC5799 MOD1-EC5799_3_length_287374_cov_44.5357, whole genome shotgun sequence (287374 bp)
Overview 1 RT 1: 281480-287181 bp Neighborhood of RT #1 [281480, 287300] SLATT_5 RVT-UG17 Caudo_TAP ABC_SMC2_euk Collar Phage_fiber Phage_fiber Phage_fiber Phage_fiber Feature: gene Location: 281480-281620 bp Feature: gene Location: 281633-282184 bp Feature: domain Description: SLATT_5 Location: 281639-282155 bp Feature: domain Description: SLATT_5 Location: 2 81639-2 82 155 bp Feature: gene Location: 282162-283532 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 282390-282996 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2 82 390-2 82 996 bp Feature: gene Location: 283645-284229 bp Feature: domain Description: Caudo_TAP Location: 283861-284218 bp Feature: domain Description: Caudo_TAP Location: 2 83861-2 842 18 bp Feature: gene Location: 284229-287300 bp Feature: domain Description: ABC_SMC2_euk Location: 284406-285411 bp Feature: domain Description: ABC_SMC2 _euk Location: 2 84406-2 85411 bp Feature: domain Description: Collar Location: 286671-286809 bp Feature: domain Description: Collar Location: 2 86671-2 86809 bp Feature: domain Description: Phage_fiber Location: 286860-286899 bp Feature: domain Description: Phage_fiber Location: 2 86860-2 86899 bp Feature: domain Description: Phage_fiber Location: 286956-286995 bp Feature: domain Description: Phage_fiber Location: 2 86956-2 86995 bp Feature: domain Description: Phage_fiber Location: 287103-287142 bp Feature: domain Description: Phage_fiber Location: 2 87103-2 87142 bp Feature: domain Description: Phage_fiber Location: 287148-287181 bp Feature: domain Description: Phage_fiber Location: 2 87148-2 87181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Caudo_TAP (pfam02413), ABC_SMC2_euk (cd03273), Collar (pfam07484), Phage_fiber (pfam03335)