myRT

myRT report for GCA_002518065.1_ASM251806v1

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Seq: NODA01000061.1 Escherichia coli strain MOD1-EC5776 MOD1-EC5776_61_length_11371_cov_59.7486, whole genome shotgun sequence (11371 bp)
Overview 1 RT 1: 1119-4945 bp Neighborhood of RT #1 [1119, 4945] DDE_Tnp_IS66 DDE_Tnp_IS66_C PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 1119-1637 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1137-1482 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 1 37-1 482 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1503-1614 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 503-1 61 4 bp Feature: gene Location: 1760-1984 bp Feature: domain Description: PHA02517 Location: 1766-1919 bp Feature: domain Description: PHA0251 7 Location: 1 766-1 91 9 bp Feature: gene Location: 2576-4099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2849-3581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2849-3581 bp Feature: domain Description: GIIM Note: maturase Location: 3656-3854 bp Feature: domain Description: GIIM Note: maturase Location: 3656-3854 bp Feature: gene Location: 4216-4662 bp Feature: domain Description: PHA02517 Location: 4219-4660 bp Feature: domain Description: PHA0251 7 Location: 421 9-4660 bp Feature: gene Location: 4628-4945 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)