myRT

myRT report for GCA_002518375.1_ASM251837v1

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Seq: NOMB01000009.1 Escherichia coli strain MOD1-EC7002 MOD1-EC7002_9_length_129723_cov_44.5801, whole genome shotgun sequence (129723 bp)
Overview 1 RT 1: 122267-125900 bp Neighborhood of RT #1 [122267, 125929] DUF932 RVT-GII Intron_maturas2 HNHc HTH_23 InsE TnpB_IS66 Feature: gene Location: 122267-122512 bp Feature: gene Location: 122512-122898 bp Feature: domain Description: DUF932 Location: 122518-122863 bp Feature: domain Description: DUF932 Location: 1 2251 8-1 22863 bp Feature: gene Location: 123071-124864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123347-124142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 23347-1 241 42 bp Feature: domain Description: Intron_maturas2 Location: 124268-124493 bp Feature: domain Description: Intron_maturas2 Location: 1 24268-1 24493 bp Feature: domain Description: HNHc Note: nucleases Location: 124688-124838 bp Feature: domain Description: HNHc Note: nucleases Location: 1 24688-1 24838 bp Feature: gene Location: 124905-125582 bp Feature: domain Description: HTH_23 Location: 124965-125076 bp Feature: domain Description: HTH_23 Location: 1 24965-1 25076 bp Feature: domain Description: InsE Location: 125208-125562 bp Feature: domain Description: InsE Location: 1 25208-1 25562 bp Feature: gene Location: 125582-125929 bp Feature: domain Description: TnpB_IS66 Location: 125609-125900 bp Feature: domain Description: TnpB_IS66 Location: 1 25609-1 25900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), HTH_23 (pfam13384), InsE (COG2963), TnpB_IS66 (pfam05717)