myRT

myRT report for GCA_002518525.1_ASM251852v1

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Seq: NOMJ01000001.1 Escherichia coli strain MOD1-EC6991 MOD1-EC6991_1_length_361084_cov_68.7284, whole genome shotgun sequence (361084 bp)
Overview 1 RT 1: 284180-293753 bp Neighborhood of RT #1 [284180, 293767] Phage_GPA RVT-AbiP2 RVT-Retrons Q P Feature: gene Location: 284180-286456 bp Feature: domain Description: Phage_GPA Location: 284579-285566 bp Feature: domain Description: Phage_GPA Location: 284579-285566 bp Feature: gene Location: 286518-286778 bp Feature: gene Location: 286944-288488 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 287361-287814 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 287361 -28781 4 bp Feature: gene Location: 288683-288829 bp Feature: gene Location: 289039-290229 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 289189-289771 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2891 89-289771 bp Feature: gene Location: 290976-291995 bp Feature: domain Description: Q Location: 290979-291990 bp Feature: domain Description: Q Location: 290979-291 990 bp Feature: gene Location: 291995-293767 bp Feature: domain Description: P Location: 292022-293753 bp Feature: domain Description: P Location: 292022-293753 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_GPA (pfam05840), RVT-AbiP2, RVT-Retrons, Q (PHA02536), P (PHA02535)

Seq: NOMJ01000003.1 Escherichia coli strain MOD1-EC6991 MOD1-EC6991_3_length_329175_cov_73.1252, whole genome shotgun sequence (329175 bp)
Overview 1 RT 1: 251758-255978 bp Neighborhood of RT #1 [251758, 255978] RVT-UG7 PRK09692 Feature: gene Location: 251758-251898 bp Feature: gene Location: 252008-252748 bp Feature: gene Location: 252745-254373 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 253153-253582 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2 53153-2 53582 bp Feature: gene Location: 254366-255550 bp Feature: domain Description: PRK09692 Location: 254372-255527 bp Feature: domain Description: PRK09692 Location: 2 54372 -2 5552 7 bp Feature: gene Location: 255826-255978 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK09692 (Integrase; provisional)