myRT

myRT report for GCA_002518865.1_ASM251886v1

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Seq: NONB01000001.1 Escherichia coli strain MOD1-EC6972 MOD1-EC6972_1_length_307608_cov_43.1457, whole genome shotgun sequence (307608 bp)
Overview 1 RT 1: 11609-18396 bp Neighborhood of RT #1 [11609, 19286] Q RVT-Retrons RVT-AbiP2 Phage_GPA Feature: gene Location: 11609-12628 bp Feature: domain Description: Q Location: 11612-12623 bp Feature: domain Description: Q Location: 1 1 61 2-1 2623 bp Feature: gene Location: 12671-13378 bp Feature: gene Location: 13375-14565 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13525-14107 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 3525-1 41 07 bp Feature: gene Location: 15116-16660 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 15533-15986 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 5533-1 5986 bp Feature: gene Location: 16826-17086 bp Feature: gene Location: 17148-19286 bp Feature: domain Description: Phage_GPA Location: 17409-18396 bp Feature: domain Description: Phage_GPA Location: 1 7409-1 8396 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), RVT-Retrons, RVT-AbiP2, Phage_GPA (pfam05840)

Seq: NONB01000023.1 Escherichia coli strain MOD1-EC6972 MOD1-EC6972_23_length_85749_cov_42.2777, whole genome shotgun sequence (85749 bp)
Overview 1 RT 1: 78513-82920 bp Neighborhood of RT #1 [78513, 82934] RVT-UG7 PRK09692 INT_P4_C Feature: gene Location: 78513-78653 bp Feature: gene Location: 78763-79503 bp Feature: gene Location: 79500-81128 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 79908-80337 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 79908-80337 bp Feature: gene Location: 81121-82305 bp Feature: domain Description: PRK09692 Location: 81127-82282 bp Feature: domain Description: PRK09692 Location: 8112 7-82 2 82 bp Feature: gene Location: 82707-82934 bp Feature: domain Description: INT_P4_C Location: 82791-82920 bp Feature: domain Description: INT_P4_C Location: 82 791-82 92 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK09692 (Integrase; provisional), INT_P4_C (cd00801)