myRT

myRT report for GCA_002519495.1_ASM251949v1

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Seq: NOOG01000025.1 Escherichia coli strain MOD1-EC6938 MOD1-EC6938_25_length_56824_cov_44.2437, whole genome shotgun sequence (56824 bp)
Overview 1 RT 1: 40594-46927 bp Neighborhood of RT #1 [40594, 46932] SIR2_2 RVT-Retrons Q P Feature: gene Location: 40594-41637 bp Feature: domain Description: SIR2_2 Location: 40975-41563 bp Feature: domain Description: SIR2_2 Location: 40975-41 563 bp Feature: gene Location: 41954-42097 bp Feature: gene Location: 42328-44085 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42472-43093 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42472-43093 bp Feature: gene Location: 44135-45166 bp Feature: domain Description: Q Location: 44138-45161 bp Feature: domain Description: Q Location: 441 38-451 61 bp Feature: gene Location: 45166-46932 bp Feature: domain Description: P Location: 45193-46927 bp Feature: domain Description: P Location: 451 93-46927 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SIR2_2 (pfam13289), RVT-Retrons, Q (PHA02536), P (PHA02535)

Seq: NOOG01000009.1 Escherichia coli strain MOD1-EC6938 MOD1-EC6938_9_length_155972_cov_44.2147, whole genome shotgun sequence (155972 bp)
Overview 1 RT 1: 109594-115692 bp Neighborhood of RT #1 [109594, 115703] PRK15011 RVT-Retrons Prim_Zn_Ribbon COG3378 Feature: gene Location: 109594-110058 bp Feature: domain Description: PRK15011 Location: 109603-110056 bp Feature: domain Description: PRK15011 Location: 109603-110056 bp Feature: gene Location: 110449-110631 bp Feature: gene Location: 110880-111830 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 110979-111570 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 110979-111570 bp Feature: gene Location: 111817-112767 bp Feature: gene Location: 113370-115703 bp Feature: domain Description: Prim_Zn_Ribbon Location: 113460-113568 bp Feature: domain Description: Prim_Zn_Ribbon Location: 113460-113568 bp Feature: domain Description: COG3378 Location: 114180-115692 bp Feature: domain Description: COG3378 Location: 114180-115692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15011 (sugar efflux transporter SetB), RVT-Retrons, Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase )