myRT

myRT report for GCA_002520375.1_ASM252037v1

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Seq: NOPY01000037.1 Escherichia coli strain MOD1-EC6863 MOD1-EC6863_37_length_41257_cov_33.6932, whole genome shotgun sequence (41257 bp)
Overview 1 RT 1: 35547-40074 bp Neighborhood of RT #1 [35547, 40074] PRK15047 RutF RVT-GII GIIM Feature: gene Location: 35547-36392 bp Feature: domain Description: PRK15047 Location: 35550-36390 bp Feature: domain Description: PRK1 5047 Location: 35550-36390 bp Feature: gene Location: 36567-37136 bp Feature: domain Description: RutF Location: 36621-37125 bp Feature: domain Description: RutF Location: 36621 -371 25 bp Feature: gene Location: 37431-38930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37884-38541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37884-38541 bp Feature: domain Description: GIIM Note: maturase Location: 38625-38835 bp Feature: domain Description: GIIM Note: maturase Location: 38625-38835 bp Feature: gene Location: 39279-39653 bp Feature: gene Location: 39874-40074 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15047 (N-hydroxyarylamine O-acetyltransferase; Provisional), RutF (TIGR03615), RVT-GII, GIIM (pfam08388)

Seq: NOPY01000003.1 Escherichia coli strain MOD1-EC6863 MOD1-EC6863_3_length_211713_cov_35.6966, whole genome shotgun sequence (211713 bp)
Overview 1 RT 1: 39870-43683 bp Neighborhood of RT #1 [39870, 43688] RVT-Retrons Q Feature: gene Location: 39870-40205 bp Feature: gene Location: 40477-40620 bp Feature: gene Location: 40851-42353 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40995-41616 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40995-41616 bp Feature: gene Location: 42386-42607 bp Feature: gene Location: 42657-43688 bp Feature: domain Description: Q Location: 42660-43683 bp Feature: domain Description: Q Location: 42 660-43683 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Q (PHA02536)

Seq: NOPY01000048.1 Escherichia coli strain MOD1-EC6863 MOD1-EC6863_48_length_34131_cov_21.156, whole genome shotgun sequence (34131 bp)
Overview 1 RT 1: 103-2407 bp Neighborhood of RT #1 [103, 2409] RVT-GII GIIM YdeI Feature: gene Location: 103-324 bp Feature: gene Location: 321-1691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 657-1269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 657-1269 bp Feature: domain Description: GIIM Note: maturase Location: 1329-1533 bp Feature: domain Description: GIIM Note: maturase Location: 13 29-153 3 bp Feature: gene Location: 1714-1869 bp Feature: gene Location: 2023-2409 bp Feature: domain Description: YdeI Location: 2026-2407 bp Feature: domain Description: YdeI Location: 2026-2407 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YdeI (COG4430), RVT-GII, GIIM (pfam08388)