myRT

myRT report for GCA_002521365.1_ASM252136v1

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Seq: NOTA01000031.1 Escherichia coli strain MOD1-EC6747 MOD1-EC6747_31_length_41306_cov_64.5671, whole genome shotgun sequence (41306 bp)
Overview 1 RT 1: 20565-24288 bp Neighborhood of RT #1 [20565, 24293] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 20565-20771 bp Feature: gene Location: 21105-21314 bp Feature: gene Location: 21449-23350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21716-22547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 71 6-22547 bp Feature: domain Description: Intron_maturas2 Location: 22661-22919 bp Feature: domain Description: Intron_maturas2 Location: 22661 -2291 9 bp Feature: domain Description: HNHc Note: nucleases Location: 23093-23255 bp Feature: domain Description: HNHc Note: nucleases Location: 23093-23255 bp Feature: gene Location: 23545-23997 bp Feature: domain Description: PRK13732 Location: 23551-23995 bp Feature: domain Description: PRK1 3732 Location: 23551 -23995 bp Feature: gene Location: 24060-24293 bp Feature: domain Description: DUF905 Location: 24090-24288 bp Feature: domain Description: DUF905 Location: 24090-24288 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)

Seq: NOTA01000047.1 Escherichia coli strain MOD1-EC6747 MOD1-EC6747_47_length_9174_cov_53.9092, whole genome shotgun sequence (9174 bp)
Overview 1 RT 1: 1458-8819 bp Neighborhood of RT #1 [1458, 8914] PAAR_2 RhsA RHS_repeat RHS_repeat RHS_repeat RHS_repeat RhsA RVT-GII GIIM Feature: gene Location: 1458-5678 bp Feature: domain Description: PAAR_2 Location: 1464-1545 bp Feature: domain Description: PAAR_2 Location: 1464-1545 bp Feature: domain Description: RhsA Location: 2043-2472 bp Feature: domain Description: RhsA Location: 2 043-2 472 bp Feature: domain Description: RHS_repeat Location: 2553-2643 bp Feature: domain Description: RHS_repeat Location: 2 553-2 643 bp Feature: domain Description: RHS_repeat Location: 2697-2790 bp Feature: domain Description: RHS_repeat Location: 2 697-2 790 bp Feature: domain Description: RHS_repeat Location: 2823-2916 bp Feature: domain Description: RHS_repeat Location: 2 82 3-2 916 bp Feature: domain Description: RHS_repeat Location: 2937-3054 bp Feature: domain Description: RHS_repeat Location: 2 937-3054 bp Feature: domain Description: RhsA Location: 3075-5244 bp Feature: domain Description: RhsA Location: 3075-52 44 bp Feature: gene Location: 6692-7066 bp Feature: gene Location: 7415-8914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7868-8525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7868-852 5 bp Feature: domain Description: GIIM Note: maturase Location: 8609-8819 bp Feature: domain Description: GIIM Note: maturase Location: 8609-8819 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAAR_2 (cd14738), RhsA (COG3209), RHS_repeat (pfam05593), RVT-GII, GIIM (pfam08388)