myRT

myRT report for GCA_002521765.1_ASM252176v1

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Seq: NORP01000050.1 Escherichia coli strain MOD1-EC6790 MOD1-EC6790_50_length_15983_cov_30.623, whole genome shotgun sequence (15983 bp)
Overview 1 RT 1: 2322-6322 bp Neighborhood of RT #1 [2322, 6330] DcuC RVT-GII Asparaginase_2 Feature: gene Location: 2322-3683 bp Feature: domain Description: DcuC Location: 2325-3657 bp Feature: domain Description: DcuC Location: 2325-3657 bp Feature: gene Location: 3736-4107 bp Feature: gene Location: 4329-4775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4635-4737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4635-4737 bp Feature: gene Location: 4823-4972 bp Feature: gene Location: 5299-6330 bp Feature: domain Description: Asparaginase_2 Location: 5389-6322 bp Feature: domain Description: Asparaginase_2 Location: 5389-6322 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DcuC (TIGR00771), RVT-GII, Asparaginase_2 (pfam01112)

Seq: NORP01000058.1 Escherichia coli strain MOD1-EC6790 MOD1-EC6790_58_length_8736_cov_30.9479, whole genome shotgun sequence (8736 bp)
Overview 1 RT 1: 2-4237 bp Neighborhood of RT #1 [2, 4237] RVT-UG7 PRK09692 Feature: gene Location: 2-157 bp Feature: gene Location: 267-1007 bp Feature: gene Location: 1004-2632 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1412-1841 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1412 -1841 bp Feature: gene Location: 2625-3809 bp Feature: domain Description: PRK09692 Location: 2631-3786 bp Feature: domain Description: PRK09692 Location: 2 631-3786 bp Feature: gene Location: 4085-4237 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK09692 (Integrase; provisional)