myRT

myRT report for GCA_002522015.1_ASM252201v1

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Seq: NOSI01000004.1 Escherichia coli strain MOD1-EC6767 MOD1-EC6767_4_length_297601_cov_33.0791, whole genome shotgun sequence (297600 bp)
Overview 1 RT 1: 279132-285168 bp Neighborhood of RT #1 [279132, 285185] PRK09692 RVT-UG5 nitrilase Psu Feature: gene Location: 279132-279356 bp Feature: gene Location: 279501-280757 bp Feature: domain Description: PRK09692 Location: 279510-280713 bp Feature: domain Description: PRK09692 Location: 27951 0-28071 3 bp Feature: gene Location: 280849-283725 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 281323-281851 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 281 323-281 851 bp Feature: domain Description: nitrilase Location: 283063-283645 bp Feature: domain Description: nitrilase Location: 283063-283645 bp Feature: gene Location: 283722-284411 bp Feature: gene Location: 284613-285185 bp Feature: domain Description: Psu Location: 284631-285168 bp Feature: domain Description: Psu Location: 284631 -2851 68 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-UG5, nitrilase (cl11424), Psu (pfam07455)

Seq: NOSI01000095.1 Escherichia coli strain MOD1-EC6767 MOD1-EC6767_95_length_1944_cov_31.4703, whole genome shotgun sequence (1944 bp)
Overview 1 RT 1: 29-1735 bp Neighborhood of RT #1 [29, 1735] RVT_N RVT-GII GIIM Feature: gene Location: 29-1273 bp Feature: domain Description: RVT_N Location: 77-314 bp Feature: domain Description: RVT_N Location: 77-314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-1007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-1007 bp Feature: domain Description: GIIM Note: maturase Location: 1058-1223 bp Feature: domain Description: GIIM Note: maturase Location: 1058-12 2 3 bp Feature: gene Location: 1553-1735 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)