myRT

myRT report for GCA_002522085.1_ASM252208v1

Download annotations/find similar RTs

Seq: NOSM01000079.1 Escherichia coli strain MOD1-EC6762 MOD1-EC6762_79_length_2310_cov_249.667, whole genome shotgun sequence (2310 bp)
Overview 1 RT 1: 107-2295 bp Neighborhood of RT #1 [107, 2295] RVT-GII GIIM Feature: gene Location: 107-1630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 380-1112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 380-1 1 1 2 bp Feature: domain Description: GIIM Note: maturase Location: 1190-1385 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 90-1 385 bp Feature: gene Location: 1924-2295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NOSM01000007.1 Escherichia coli strain MOD1-EC6762 MOD1-EC6762_7_length_266716_cov_76.4831, whole genome shotgun sequence (266716 bp)
Overview 1 RT 1: 259533-262498 bp Neighborhood of RT #1 [259533, 262695] SLATT_5 RVT-UG17 DUF4094 Peptidase_S74 Feature: gene Location: 259533-259673 bp Feature: gene Location: 259686-260237 bp Feature: domain Description: SLATT_5 Location: 259692-260208 bp Feature: domain Description: SLATT_5 Location: 2 59692 -2 602 08 bp Feature: gene Location: 260215-261585 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 260443-261049 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2 60443-2 61049 bp Feature: gene Location: 261693-261980 bp Feature: gene Location: 261991-262695 bp Feature: domain Description: DUF4094 Location: 262033-262123 bp Feature: domain Description: DUF4094 Location: 2 62 033-2 62 12 3 bp Feature: domain Description: Peptidase_S74 Location: 262339-262498 bp Feature: domain Description: Peptidase_S74 Location: 2 62 339-2 62 498 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, DUF4094 (pfam13334), Peptidase_S74 (pfam13884)