myRT

myRT report for GCA_002522265.1_ASM252226v1

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Seq: NOTD01000105.1 Escherichia coli strain MOD1-EC6744 MOD1-EC6744_105_length_1367_cov_131.159, whole genome shotgun sequence (1367 bp)
Overview 1 RT 1: 107-1121 bp Neighborhood of RT #1 [107, 1366] RVT-GII GIIM Feature: gene Location: 107-1366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116-848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 6-848 bp Feature: domain Description: GIIM Note: maturase Location: 923-1121 bp Feature: domain Description: GIIM Note: maturase Location: 923-1 1 21 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NOTD01000010.1 Escherichia coli strain MOD1-EC6744 MOD1-EC6744_10_length_166937_cov_34.1744, whole genome shotgun sequence (166937 bp)
Overview 1 RT 1: 7101-11456 bp Neighborhood of RT #1 [7101, 11479] HTH_XRE RVT-Retrons PRK13889 TraD Feature: gene Location: 7101-7316 bp Feature: gene Location: 7407-7688 bp Feature: domain Description: HTH_XRE Location: 7422-7587 bp Feature: domain Description: HTH_XRE Location: 742 2 -7587 bp Feature: gene Location: 7681-8781 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7822-8374 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 782 2 -8374 bp Feature: gene Location: 8858-10360 bp Feature: domain Description: PRK13889 Location: 8861-9440 bp Feature: domain Description: PRK13889 Location: 8861-9440 bp Feature: gene Location: 11168-11479 bp Feature: domain Description: TraD Location: 11282-11456 bp Feature: domain Description: TraD Location: 112 82 -11456 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraD (pfam06412), HTH_XRE (smart00530), RVT-Retrons, PRK13889 (conjugal transfer relaxase TraA; Provisional)

Seq: NOTD01000172.1 Escherichia coli strain MOD1-EC6744 MOD1-EC6744_242_length_221_cov_39.7431, whole genome shotgun sequence (221 bp)
Overview 1 RT 1: 2-218 bp Neighborhood of RT #1 [2, 220] RVT-GII Feature: gene Location: 2-220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155-218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155-218 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII