myRT

myRT report for GCA_002522335.1_ASM252233v1

Download annotations/find similar RTs

Seq: NOTJ01000071.1 Escherichia coli strain MOD1-EC6738 MOD1-EC6738_71_length_17457_cov_34.2619, whole genome shotgun sequence (17457 bp)
Overview 1 RT 1: 13537-17453 bp Neighborhood of RT #1 [13537, 17455] DUF905 DUF932 RVT-GII Intron_maturas2 HNHc DUF932 Antirestrict Feature: gene Location: 13537-13770 bp Feature: domain Description: DUF905 Location: 13561-13759 bp Feature: domain Description: DUF905 Location: 1 3561 -1 3759 bp Feature: gene Location: 13870-14268 bp Feature: domain Description: DUF932 Location: 13978-14260 bp Feature: domain Description: DUF932 Location: 1 3978-1 4260 bp Feature: gene Location: 14760-16538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15021-15816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5021 -1 581 6 bp Feature: domain Description: Intron_maturas2 Location: 15942-16167 bp Feature: domain Description: Intron_maturas2 Location: 1 5942-1 61 67 bp Feature: domain Description: HNHc Note: nucleases Location: 16362-16512 bp Feature: domain Description: HNHc Note: nucleases Location: 1 6362-1 651 2 bp Feature: gene Location: 16690-17097 bp Feature: domain Description: DUF932 Location: 16696-17062 bp Feature: domain Description: DUF932 Location: 1 6696-1 7062 bp Feature: gene Location: 17189-17455 bp Feature: domain Description: Antirestrict Location: 17387-17453 bp Feature: domain Description: Antirestrict Location: 1 7387-1 7453 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), DUF932 (pfam06067), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Antirestrict (pfam03230)

Seq: NOTJ01000095.1 Escherichia coli strain MOD1-EC6738 MOD1-EC6738_95_length_7290_cov_47.2477, whole genome shotgun sequence (7290 bp)
Overview 1 RT 1: 4960-7214 bp Neighborhood of RT #1 [4960, 7216] RVT-GII GIIM RAYT Feature: gene Location: 4960-5097 bp Feature: gene Location: 5187-5456 bp Feature: gene Location: 5481-6827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5769-6387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5769-6387 bp Feature: domain Description: GIIM Note: maturase Location: 6435-6666 bp Feature: domain Description: GIIM Note: maturase Location: 6435-6666 bp Feature: gene Location: 6983-7216 bp Feature: domain Description: RAYT Location: 7061-7214 bp Feature: domain Description: RAYT Location: 7061-72 14 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RAYT (COG1943)