myRT

myRT report for GCA_002522525.1_ASM252252v1

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Seq: NOTX01000002.1 Escherichia coli strain MOD1-EC6706 MOD1-EC6706_2_length_461254_cov_61.7502, whole genome shotgun sequence (461254 bp)
Overview 1 RT 1: 92037-95332 bp Neighborhood of RT #1 [92037, 95346] CdiI_3 RVT-GII RVT-GII GIIM ArgR Feature: gene Location: 92037-92423 bp Feature: domain Description: CdiI_3 Location: 92061-92337 bp Feature: domain Description: CdiI_3 Location: 92061 -92337 bp Feature: gene Location: 92622-92762 bp Feature: gene Location: 92870-93352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93191-93278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 931 91 -93278 bp Feature: gene Location: 93391-94161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93394-93808 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93394-93808 bp Feature: domain Description: GIIM Note: maturase Location: 93859-94024 bp Feature: domain Description: GIIM Note: maturase Location: 93859-94024 bp Feature: gene Location: 94411-94629 bp Feature: gene Location: 94867-95346 bp Feature: domain Description: ArgR Location: 94900-95332 bp Feature: domain Description: ArgR Location: 94900-95332 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CdiI_3 (pfam18616), RVT-GII, GIIM (pfam08388), ArgR (COG1438)

Seq: NOTX01000036.1 Escherichia coli strain MOD1-EC6706 MOD1-EC6706_36_length_31086_cov_54.009, whole genome shotgun sequence (31086 bp)
Overview 1 RT 1: 25534-30812 bp Neighborhood of RT #1 [25534, 30812] PRK09692 RVT-UG5 nitrilase Feature: gene Location: 25534-25758 bp Feature: gene Location: 25903-27159 bp Feature: domain Description: PRK09692 Location: 25912-27115 bp Feature: domain Description: PRK09692 Location: 2 5912 -2 7115 bp Feature: gene Location: 27251-28210 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 27725-28193 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 772 5-2 8193 bp Feature: gene Location: 28279-30126 bp Feature: domain Description: nitrilase Location: 29461-30046 bp Feature: domain Description: nitrilase Location: 2 9461-30046 bp Feature: gene Location: 30123-30812 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-UG5, nitrilase (cl11424)