myRT

myRT report for GCA_002522785.1_ASM252278v1

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Seq: NOUN01000120.1 Escherichia coli strain MOD1-EC6689 MOD1-EC6689_120_length_2881_cov_46.0635, whole genome shotgun sequence (2880 bp)
Overview 1 RT 1: 704-2633 bp Neighborhood of RT #1 [704, 2878] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 704-1108 bp Feature: domain Description: InsE Location: 734-1070 bp Feature: domain Description: InsE Location: 734-1 070 bp Feature: gene Location: 1137-1493 bp Feature: domain Description: PHA02517 Location: 1140-1449 bp Feature: domain Description: PHA0251 7 Location: 1 1 40-1 449 bp Feature: gene Location: 1610-2878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1628-2360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 628-2360 bp Feature: domain Description: GIIM Note: maturase Location: 2435-2633 bp Feature: domain Description: GIIM Note: maturase Location: 2435-2633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NOUN01000142.1 Escherichia coli strain MOD1-EC6689 MOD1-EC6689_142_length_1329_cov_89.0599, whole genome shotgun sequence (1329 bp)
Overview 1 RT 1: 2-1328 bp Neighborhood of RT #1 [2, 1327] PHA02517 RVT-GII Feature: gene Location: 2-409 bp Feature: domain Description: PHA02517 Location: 5-344 bp Feature: domain Description: PHA02 517 Location: 5-344 bp Feature: gene Location: 1001-1327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1274-1328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 74-132 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII

Seq: NOUN01000058.1 Escherichia coli strain MOD1-EC6689 MOD1-EC6689_58_length_23425_cov_38.4136, whole genome shotgun sequence (23425 bp)
Overview 1 RT 1: 13501-17784 bp Neighborhood of RT #1 [13501, 17792] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 13501-14406 bp Feature: gene Location: 14544-14735 bp Feature: gene Location: 14892-15431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15222-15300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15222-153 00 bp Feature: gene Location: 15459-15980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15465-15747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15465-15747 bp Feature: domain Description: GIIM Note: maturase Location: 15795-15975 bp Feature: domain Description: GIIM Note: maturase Location: 15795-15975 bp Feature: gene Location: 16302-16490 bp Feature: gene Location: 16530-17792 bp Feature: domain Description: YesM Location: 17043-17784 bp Feature: domain Description: YesM Location: 17043 -17784 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: NOUN01000078.1 Escherichia coli strain MOD1-EC6689 MOD1-EC6689_78_length_11665_cov_33.4271, whole genome shotgun sequence (11665 bp)
Overview 1 RT 1: 1-1027 bp Neighborhood of RT #1 [1, 1035] RVT-GII PRK10173 PRK10173 Feature: gene Location: 1-252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22-94 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22-94 bp Feature: gene Location: 291-602 bp Feature: domain Description: PRK10173 Location: 294-513 bp Feature: domain Description: PRK10173 Location: 294 -513 bp Feature: gene Location: 586-1035 bp Feature: domain Description: PRK10173 Location: 589-1027 bp Feature: domain Description: PRK10173 Location: 589-1027 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: NOUN01000007.1 Escherichia coli strain MOD1-EC6689 MOD1-EC6689_7_length_156591_cov_37.5163, whole genome shotgun sequence (156591 bp)
Overview 1 RT 1: 22442-28685 bp Neighborhood of RT #1 [22442, 28822] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 22442-22708 bp Feature: domain Description: Phage_integrase Location: 22508-22604 bp Feature: domain Description: Phage_integrase Location: 225 08-22604 bp Feature: gene Location: 22791-23261 bp Feature: gene Location: 23608-26817 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 24136-24625 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 24136-24625 bp Feature: domain Description: nitrilase Location: 26131-26728 bp Feature: domain Description: nitrilase Location: 26131-26728 bp Feature: gene Location: 27112-27915 bp Feature: domain Description: AbiEi_3_N Location: 27145-27406 bp Feature: domain Description: AbiEi_3_N Location: 27145 -27406 bp Feature: domain Description: AbiEi_3 Location: 27418-27874 bp Feature: domain Description: AbiEi_3 Location: 27418-27874 bp Feature: gene Location: 27902-28822 bp Feature: domain Description: AbiEii Location: 27944-28685 bp Feature: domain Description: AbiEii Location: 27944-28685 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)