myRT

myRT report for GCA_002522945.1_ASM252294v1

Download annotations/find similar RTs

Seq: NXKZ01000237.1 Klebsiella pneumoniae strain ST-17:K120 NODE_237_length_6957_cov_37.2429_ID_473, whole genome shotgun sequence (6957 bp)
Overview 1 RT 1: 2299-6916 bp Neighborhood of RT #1 [2299, 6954] TIGR02646 COG3950 RVT-Retrons PRK09692 Feature: gene Location: 2299-2928 bp Feature: domain Description: TIGR02646 Location: 2389-2764 bp Feature: domain Description: TIGR02646 Location: 2389-2764 bp Feature: gene Location: 2925-4517 bp Feature: domain Description: COG3950 Location: 3105-4326 bp Feature: domain Description: COG3950 Location: 31 05-4326 bp Feature: gene Location: 4495-5460 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4603-5200 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4603-5200 bp Feature: gene Location: 5886-6527 bp Feature: gene Location: 6529-6954 bp Feature: domain Description: PRK09692 Location: 6535-6916 bp Feature: domain Description: PRK09692 Location: 6535-691 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK09692 (Integrase; provisional)

Seq: NXKZ01000322.1 Klebsiella pneumoniae strain ST-17:K120 NODE_322_length_4676_cov_39.1331_ID_643, whole genome shotgun sequence (4676 bp)
Overview 1 RT 1: 3599-4671 bp Neighborhood of RT #1 [3599, 4673] RVT-UG2 Feature: gene Location: 3599-3787 bp Feature: gene Location: 4059-4238 bp Feature: gene Location: 4317-4673 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4566-4671 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4566-4671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2

Seq: NXKZ01000405.1 Klebsiella pneumoniae strain ST-17:K120 NODE_405_length_3045_cov_35.8955_ID_809, whole genome shotgun sequence (3045 bp)
Overview 1 RT 1: 1-2090 bp Neighborhood of RT #1 [1, 2090] RVT-UG2 PinE Feature: gene Location: 1-1077 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4-784 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4-784 bp Feature: gene Location: 1176-1808 bp Feature: domain Description: PinE Location: 1239-1794 bp Feature: domain Description: PinE Location: 123 9-1794 bp Feature: gene Location: 1947-2090 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2, PinE (COG1961)