myRT

myRT report for GCA_002522955.1_ASM252295v1

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Seq: NXLB01000001.1 Klebsiella pneumoniae strain ST-101:K126 NODE_1_length_112298_cov_40.441_ID_1, whole genome shotgun sequence (112295 bp)
Overview 1 RT 1: 102165-108614 bp Neighborhood of RT #1 [102165, 108614] AAA_21 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 102165-102470 bp Feature: gene Location: 103867-105126 bp Feature: domain Description: AAA_21 Location: 104173-104395 bp Feature: domain Description: AAA_21 Location: 1 041 73-1 04395 bp Feature: gene Location: 105741-106841 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 105921-106455 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 05921 -1 06455 bp Feature: gene Location: 107497-108333 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 107986-108157 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 1 07986-1 081 57 bp Feature: gene Location: 108363-108614 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)

Seq: NXLB01000002.1 Klebsiella pneumoniae strain ST-101:K126 NODE_2_length_99331_cov_40.6099_ID_3, whole genome shotgun sequence (99328 bp)
Overview 1 RT 1: 70180-73254 bp Neighborhood of RT #1 [70180, 73259] PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 70180-70398 bp Feature: domain Description: PRK09678 Location: 70183-70381 bp Feature: domain Description: PRK09678 Location: 70183-70381 bp Feature: gene Location: 70645-70833 bp Feature: gene Location: 70802-71575 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 70937-71390 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 70937-71390 bp Feature: gene Location: 72190-72672 bp Feature: domain Description: SmpB Location: 72220-72664 bp Feature: domain Description: SmpB Location: 72 2 2 0-72 664 bp Feature: gene Location: 72783-73259 bp Feature: domain Description: PRK10724 Location: 72789-73254 bp Feature: domain Description: PRK1072 4 Location: 72 789-732 54 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)

Seq: NXLB01000527.1 Klebsiella pneumoniae strain ST-101:K126 NODE_529_length_864_cov_243.418_ID_1057, whole genome shotgun sequence (861 bp)
Overview 1 RT 1: 2-857 bp Neighborhood of RT #1 [2, 859] RVT-GII Feature: gene Location: 2-190 bp Feature: gene Location: 344-859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 749-857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 749-857 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NXLB01000545.1 Klebsiella pneumoniae strain ST-101:K126 NODE_547_length_636_cov_222.171_ID_1093, whole genome shotgun sequence (636 bp)
Overview 1 RT 1: 2-600 bp Neighborhood of RT #1 [2, 635] RVT-GII RVT-GII Feature: gene Location: 2-220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-179 bp Feature: gene Location: 225-635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231-600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231-600 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NXLB01000548.1 Klebsiella pneumoniae strain ST-101:K126 NODE_550_length_621_cov_182.99_ID_1099, whole genome shotgun sequence (614 bp)
Overview 1 RT 1: 2-558 bp Neighborhood of RT #1 [2, 611] RVT-GII RVT-GII Feature: gene Location: 2-163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47-155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47-15 5 bp Feature: gene Location: 213-611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 234-558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 234-5 5 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NXLB01000596.1 Klebsiella pneumoniae strain ST-101:K126 NODE_598_length_473_cov_241.511_ID_1195, whole genome shotgun sequence (473 bp)
Overview 1 RT 1: 2-347 bp Neighborhood of RT #1 [2, 409] RVT-GII Feature: gene Location: 2-409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23-347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23-347 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NXLB01000597.1 Klebsiella pneumoniae strain ST-101:K126 NODE_599_length_472_cov_172.928_ID_1197, whole genome shotgun sequence (472 bp)
Overview 1 RT 1: 25-292 bp Neighborhood of RT #1 [25, 408] RVT-GII Feature: gene Location: 25-408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46-292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46-292 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NXLB01000652.1 Klebsiella pneumoniae strain ST-101:K126 NODE_654_length_369_cov_283.57_ID_1307, whole genome shotgun sequence (369 bp)
Overview 1 RT 1: 3-333 bp Neighborhood of RT #1 [3, 368] RVT-GII Feature: gene Location: 3-368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-333 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NXLB01000654.1 Klebsiella pneumoniae strain ST-101:K126 NODE_656_length_367_cov_140.425_ID_1311, whole genome shotgun sequence (367 bp)
Overview 1 RT 1: 65-293 bp Neighborhood of RT #1 [65, 325] RVT-GII Feature: gene Location: 65-325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86-293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86-29 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII