myRT

myRT report for GCA_002527335.1_ASM252733v1

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Seq: NXXI01000002.1 Listeria monocytogenes strain CFSAN045853 CFSAN045853_contig_0000002, whole genome shotgun sequence (205061 bp)
Overview 1 RT 1: 148137-153011 bp Neighborhood of RT #1 [148137, 153019] RVT-GII DUF3852 Feature: gene Location: 148137-149393 bp Feature: gene Location: 149572-149733 bp Feature: gene Location: 150110-151999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150428-151133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 50428-1 51 1 33 bp Feature: gene Location: 152094-152588 bp Feature: gene Location: 152663-153019 bp Feature: domain Description: DUF3852 Location: 152687-153011 bp Feature: domain Description: DUF3852 Location: 1 52687-1 5301 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DUF3852 (pfam12963)

Seq: NXXI01000014.1 Listeria monocytogenes strain CFSAN045853 CFSAN045853_contig_0000014, whole genome shotgun sequence (17504 bp)
Overview 1 RT 1: 7657-11733 bp Neighborhood of RT #1 [7657, 11735] YdeE PRK13316 RVT-AbiP2 Arsenite_oxidase RpmF Feature: gene Location: 7657-8136 bp Feature: domain Description: YdeE Location: 7660-8131 bp Feature: domain Description: YdeE Location: 7660-8131 bp Feature: gene Location: 8171-8659 bp Feature: domain Description: PRK13316 Location: 8297-8657 bp Feature: domain Description: PRK13316 Location: 82 97-8657 bp Feature: gene Location: 8926-10695 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 9379-9838 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 9379-9838 bp Feature: gene Location: 10925-11500 bp Feature: domain Description: Arsenite_oxidase Location: 10937-11426 bp Feature: domain Description: Arsenite_oxidase Location: 10937-1142 6 bp Feature: gene Location: 11565-11735 bp Feature: domain Description: RpmF Location: 11568-11733 bp Feature: domain Description: RpmF Location: 11568-11733 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YdeE (COG3708), PRK13316 (heme oxygenase IsdG), RVT-AbiP2, Arsenite_oxidase, RpmF (COG0333)