myRT

myRT report for GCA_002528785.1_ASM252878v1

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Seq: NXLC01000011.1 Klebsiella pneumoniae strain ST-182:K137 NODE_11_length_52342_cov_36.8811_ID_21, whole genome shotgun sequence (52342 bp)
Overview 1 RT 1: 7945-15131 bp Neighborhood of RT #1 [7945, 15131] FimC FimD RVT-UG4 EAL Feature: gene Location: 7945-8673 bp Feature: domain Description: FimC Location: 7993-8656 bp Feature: domain Description: FimC Location: 7993-8656 bp Feature: gene Location: 8705-11314 bp Feature: domain Description: FimD Location: 8762-11303 bp Feature: domain Description: FimD Location: 8762-1 1 303 bp Feature: gene Location: 11314-13344 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 11722-12166 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 1 722-1 21 66 bp Feature: gene Location: 13981-14835 bp Feature: domain Description: EAL Location: 14665-14818 bp Feature: domain Description: EAL Location: 1 4665-1 481 8 bp Feature: gene Location: 14925-15131 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, EAL (smart00052)

Seq: NXLC01000001.1 Klebsiella pneumoniae strain ST-182:K137 NODE_1_length_214285_cov_65.3105_ID_1, whole genome shotgun sequence (214285 bp)
Overview 1 RT 1: 1435-5294 bp Neighborhood of RT #1 [1435, 5294] HHA RVT-GII INT_Cre_C Feature: gene Location: 1435-1686 bp Feature: domain Description: HHA Location: 1483-1666 bp Feature: domain Description: HHA Location: 1483-1666 bp Feature: gene Location: 1776-2177 bp Feature: gene Location: 2202-3689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2607-3297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 607-32 97 bp Feature: gene Location: 3775-4911 bp Feature: domain Description: INT_Cre_C Location: 4198-4852 bp Feature: domain Description: INT_Cre_C Location: 4198-4852 bp Feature: gene Location: 4977-5294 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799)