myRT

myRT report for GCA_002528835.1_ASM252883v1

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Seq: NXLE01000001.1 Klebsiella pneumoniae strain ST-101:K169 NODE_1_length_115572_cov_45.6612_ID_1, whole genome shotgun sequence (115572 bp)
Overview 1 RT 1: 6960-13409 bp Neighborhood of RT #1 [6960, 13409] Nuc_deoxyrib_tr RVT-Retrons AAA_15 Feature: gene Location: 6960-7211 bp Feature: gene Location: 7241-8077 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 7730-7901 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 7730-7901 bp Feature: gene Location: 8733-9833 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8913-9447 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 891 3-9447 bp Feature: gene Location: 10308-12191 bp Feature: domain Description: AAA_15 Location: 10311-11319 bp Feature: domain Description: AAA_1 5 Location: 1 031 1 -1 1 31 9 bp Feature: gene Location: 13104-13409 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175)

Seq: NXLE01000342.1 Klebsiella pneumoniae strain ST-101:K169 NODE_343_length_1893_cov_349.484_ID_685, whole genome shotgun sequence (1893 bp)
Overview 1 RT 1: 347-1442 bp Neighborhood of RT #1 [347, 1834] RVT-GII Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752 -1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NXLE01000004.1 Klebsiella pneumoniae strain ST-101:K169 NODE_4_length_95816_cov_47.7046_ID_7, whole genome shotgun sequence (95813 bp)
Overview 1 RT 1: 67154-70228 bp Neighborhood of RT #1 [67154, 70233] PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 67154-67372 bp Feature: domain Description: PRK09678 Location: 67157-67355 bp Feature: domain Description: PRK09678 Location: 67157-673 55 bp Feature: gene Location: 67619-67807 bp Feature: gene Location: 67776-68549 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 67911-68364 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 67911-683 64 bp Feature: gene Location: 69164-69646 bp Feature: domain Description: SmpB Location: 69194-69638 bp Feature: domain Description: SmpB Location: 69194-6963 8 bp Feature: gene Location: 69757-70233 bp Feature: domain Description: PRK10724 Location: 69763-70228 bp Feature: domain Description: PRK10724 Location: 69763 -70228 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)