myRT

myRT report for GCA_002528845.1_ASM252884v1

Download annotations/find similar RTs

Seq: NXLG01000024.1 Escherichia coli strain ST-617:E019 NODE_24_length_77455_cov_52.7049_ID_47, whole genome shotgun sequence (77455 bp)
Overview 1 RT 1: 4538-10988 bp Neighborhood of RT #1 [4538, 10988] Nuc_deoxyrib_tr RVT-Retrons AAA_21 Feature: gene Location: 4538-4789 bp Feature: gene Location: 4819-5655 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 5308-5479 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 5308-5479 bp Feature: gene Location: 6311-7411 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6494-7022 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6494-7022 bp Feature: gene Location: 7891-9285 bp Feature: domain Description: AAA_21 Location: 8197-8419 bp Feature: domain Description: AAA_21 Location: 81 97-841 9 bp Feature: gene Location: 10683-10988 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_21 (pfam13304)

Seq: NXLG01000099.1 Escherichia coli strain ST-617:E019 NODE_99_length_2206_cov_354.642_ID_197, whole genome shotgun sequence (2206 bp)
Overview 1 RT 1: 1-1869 bp Neighborhood of RT #1 [1, 2114] RVT-GII GIIM Feature: gene Location: 1-297 bp Feature: gene Location: 591-2114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 864-1596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 864-1596 bp Feature: domain Description: GIIM Note: maturase Location: 1671-1869 bp Feature: domain Description: GIIM Note: maturase Location: 1671-1869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)