myRT

myRT report for GCA_002529225.1_ASM252922v1

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Seq: NSLY01000010.1 Prevotella intermedia strain WW2834 NODE_10_length_91036_cov_13.8862_ID_22027, whole genome shotgun sequence (91036 bp)
Overview 1 RT 1: 43720-50615 bp Neighborhood of RT #1 [43720, 50615] AAA_21 SDR_c6 RVT-UG8 RVT-UG3 Feature: gene Location: 43720-45000 bp Feature: domain Description: AAA_21 Location: 43855-44809 bp Feature: domain Description: AAA_21 Location: 43855-44809 bp Feature: gene Location: 45465-46193 bp Feature: domain Description: SDR_c6 Location: 45477-46179 bp Feature: domain Description: SDR_c6 Location: 45477-461 79 bp Feature: gene Location: 46893-48809 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 47394-47838 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 47394-47838 bp Feature: gene Location: 48806-50026 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 49094-49592 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 49094-49592 bp Feature: gene Location: 50062-50262 bp Feature: gene Location: 50385-50615 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), SDR_c6 (cd05350), RVT-UG8, RVT-UG3

Seq: NSLY01000060.1 Prevotella intermedia strain WW2834 NODE_60_length_4925_cov_11.4281_ID_22127, whole genome shotgun sequence (4925 bp)
Overview 1 RT 1: 1-4100 bp Neighborhood of RT #1 [1, 4573] DUF4372 RVT-UG8 RVT-UG3 Feature: gene Location: 1-411 bp Feature: domain Description: DUF4372 Location: 7-130 bp Feature: domain Description: DUF4372 Location: 7-130 bp Feature: gene Location: 524-730 bp Feature: gene Location: 933-2969 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1401-1854 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1401-1854 bp Feature: gene Location: 3113-4573 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3569-4100 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3569-4100 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4372 (pfam14294), RVT-UG8, RVT-UG3