myRT

myRT report for GCA_002529305.1_ASM252930v1

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Seq: NSLZ01000016.1 Prevotella intermedia strain WW855 NODE_16_length_50186_cov_10.3306_ID_40205, whole genome shotgun sequence (50186 bp)
Overview 1 RT 1: 18891-23535 bp 2 RT 2: 44018-49970 bp Neighborhood of RT #1 [18891, 23535] AbiEii RVT_N RVT-GII GIIM Neighborhood of RT #2 [44018, 50077] N6_Mtase PRK07726 Toprim_Crpt RVT-GII Intron_maturas2 HNHc DDE_Tnp_1_3 Feature: gene Location: 18891-19889 bp Feature: domain Description: AbiEii Location: 19020-19794 bp Feature: domain Description: AbiEii Location: 1 9020-1 9794 bp Feature: gene Location: 20002-21276 bp Feature: gene Location: 21278-22954 bp Feature: RT Description: RVT_N Location: 21338-21581 bp Feature: RT Description: RVT_N Location: 21 338-21 581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21626-22274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 626-22274 bp Feature: domain Description: GIIM Note: maturase Location: 22328-22559 bp Feature: domain Description: GIIM Note: maturase Location: 22328-22559 bp Feature: gene Location: 22963-23244 bp Feature: gene Location: 23368-23535 bp Feature: gene Location: 44018-45472 bp Feature: domain Description: N6_Mtase Location: 44576-44927 bp Feature: domain Description: N6_Mtase Location: 44576-44927 bp Feature: gene Location: 45505-47334 bp Feature: domain Description: PRK07726 Location: 45631-47128 bp Feature: domain Description: PRK07726 Location: 45631 -471 28 bp Feature: domain Description: Toprim_Crpt Location: 47131-47308 bp Feature: domain Description: Toprim_Crpt Location: 471 31 -47308 bp Feature: gene Location: 47324-49126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47588-48410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47588-4841 0 bp Feature: domain Description: Intron_maturas2 Location: 48485-48809 bp Feature: domain Description: Intron_maturas2 Location: 48485-48809 bp Feature: domain Description: HNHc Note: nucleases Location: 48962-49106 bp Feature: domain Description: HNHc Note: nucleases Location: 48962-491 06 bp Feature: gene Location: 49178-50077 bp Feature: domain Description: DDE_Tnp_1_3 Location: 49505-49970 bp Feature: domain Description: DDE_Tnp_1 _3 Location: 49505-49970 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), N6_Mtase (pfam02384), PRK07726 (DNA topoisomerase 3), Toprim_Crpt (pfam13342), Intron_maturas2 (pfam01348), HNHc (smart00507), DDE_Tnp_1_3 (pfam13612)