myRT

myRT report for GCA_002529485.1_ASM252948v1

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Seq: NWQG01000013.1 Mesorhizobium sanjuanii strain BSA136 contig00013, whole genome shotgun sequence (82865 bp)
Overview 1 RT 1: 1546-4904 bp Neighborhood of RT #1 [1546, 4945] PRK12829 PRK08181 RVT-GII COG4584 COG4584 Feature: gene Location: 1546-2319 bp Feature: domain Description: PRK12829 Location: 1564-2311 bp Feature: domain Description: PRK1 2829 Location: 1 564-231 1 bp Feature: gene Location: 2693-3130 bp Feature: gene Location: 3127-3894 bp Feature: domain Description: PRK08181 Location: 3172-3448 bp Feature: domain Description: PRK081 81 Location: 31 72-3448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3448-3856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3448-3856 bp Feature: gene Location: 4023-4658 bp Feature: domain Description: COG4584 Location: 4095-4539 bp Feature: domain Description: COG4584 Location: 4095-4539 bp Feature: gene Location: 4745-4945 bp Feature: domain Description: COG4584 Location: 4751-4904 bp Feature: domain Description: COG4584 Location: 4751 -4904 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12829 (short chain dehydrogenase; Provisional), PRK08181 (transposase; Validated), RVT-GII, COG4584 (Transposase )

Seq: NWQG01000093.1 Mesorhizobium sanjuanii strain BSA136 contig00093, whole genome shotgun sequence (64300 bp)
Overview 1 RT 1: 36974-42816 bp Neighborhood of RT #1 [36974, 42816] COG3177 RVT-GII PinE Zn_ribbon_recom HTH_17 HTH_17 RVT-GII Feature: gene Location: 36974-37609 bp Feature: domain Description: COG3177 Location: 37223-37565 bp Feature: domain Description: COG3177 Location: 372 2 3-37565 bp Feature: gene Location: 37855-38190 bp Feature: gene Location: 38187-38792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38598-38769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38598-38769 bp Feature: gene Location: 38854-41079 bp Feature: domain Description: PinE Location: 38902-39487 bp Feature: domain Description: PinE Location: 38902 -39487 bp Feature: domain Description: Zn_ribbon_recom Location: 39862-40030 bp Feature: domain Description: Zn_ribbon_recom Location: 39862 -40030 bp Feature: domain Description: HTH_17 Location: 40744-40861 bp Feature: domain Description: HTH_17 Location: 40744-40861 bp Feature: domain Description: HTH_17 Location: 40921-41017 bp Feature: domain Description: HTH_17 Location: 4092 1-41017 bp Feature: gene Location: 41103-41603 bp Feature: gene Location: 41717-42403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41723-42026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4172 3-42 02 6 bp Feature: gene Location: 42411-42581 bp Feature: gene Location: 42667-42816 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3177 (Fic family protein ), RVT-GII, PinE (COG1961), Zn_ribbon_recom (pfam13408), HTH_17 (pfam12728)