myRT

myRT report for GCA_002530575.1_ASM253057v1

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Seq: NTMK01000135.1 Bacillus cereus strain HZBCE-07 scaffold_134, whole genome shotgun sequence (2680 bp)
Overview 1 RT 1: 165-2450 bp Neighborhood of RT #1 [165, 2566] RVT-GII HNHc Feature: gene Location: 165-341 bp Feature: gene Location: 734-2566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1034-1739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 034-1 739 bp Feature: domain Description: HNHc Note: nucleases Location: 2318-2450 bp Feature: domain Description: HNHc Note: nucleases Location: 231 8-2450 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NTMK01000039.1 Bacillus cereus strain HZBCE-07 scaffold_38, whole genome shotgun sequence (63870 bp)
Overview 1 RT 1: 1401-7497 bp Neighborhood of RT #1 [1401, 7497] DEXHc_Snf DEXHc_Snf RVT_N RVT-GII GIIM HNH Feature: gene Location: 1401-1628 bp Feature: gene Location: 1700-4285 bp Feature: domain Description: DEXHc_Snf Location: 2486-2849 bp Feature: domain Description: DEXHc_Snf Location: 2 486-2 849 bp Feature: domain Description: DEXHc_Snf Location: 3215-3488 bp Feature: domain Description: DEXHc_Snf Location: 32 15-3488 bp Feature: gene Location: 4857-6236 bp Feature: RT Description: RVT_N Location: 4911-5157 bp Feature: RT Description: RVT_N Location: 4911-5157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5211-5865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 11-5865 bp Feature: domain Description: GIIM Note: maturase Location: 5928-6162 bp Feature: domain Description: GIIM Note: maturase Location: 592 8-6162 bp Feature: gene Location: 6239-6667 bp Feature: domain Description: HNH Note: nucleases Location: 6401-6536 bp Feature: domain Description: HNH Note: nucleases Location: 6401-6536 bp Feature: gene Location: 6913-7497 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXHc_Snf (cd17919), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: NTMK01000050.1 Bacillus cereus strain HZBCE-07 scaffold_49, whole genome shotgun sequence (65143 bp)
Overview 1 RT 1: 19561-27599 bp 2 RT 2: 31618-38694 bp Neighborhood of RT #1 [19561, 27604] beta_clamp RVT-GII RVT-GII COG4712 Neighborhood of RT #2 [31618, 38735] rpsA nuc_hydro RVT_N RVT-GII GIIM NlpD ParM_like Feature: gene Location: 19561-19890 bp Feature: gene Location: 19903-21045 bp Feature: domain Description: beta_clamp Location: 19942-21040 bp Feature: domain Description: beta_clamp Location: 19942-21040 bp Feature: gene Location: 21139-23121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21460-22195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21460-22195 bp Feature: gene Location: 23128-23319 bp Feature: gene Location: 23983-24510 bp Feature: gene Location: 24588-26489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24906-25608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24906-25608 bp Feature: gene Location: 26684-26824 bp Feature: gene Location: 27248-27604 bp Feature: domain Description: COG4712 Location: 27257-27599 bp Feature: domain Description: COG4712 Location: 27257-27599 bp Feature: gene Location: 31618-32601 bp Feature: domain Description: rpsA Location: 31885-32422 bp Feature: domain Description: rpsA Location: 3 1885-3 2422 bp Feature: gene Location: 33195-34166 bp Feature: domain Description: nuc_hydro Location: 33231-34137 bp Feature: domain Description: nuc_hydro Location: 3 3 23 1-3 413 7 bp Feature: gene Location: 34759-36405 bp Feature: RT Description: RVT_N Location: 34801-35038 bp Feature: RT Description: RVT_N Location: 3 4801-3 503 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35092-35752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 5092-3 5752 bp Feature: domain Description: GIIM Note: maturase Location: 35821-36052 bp Feature: domain Description: GIIM Note: maturase Location: 3 5821-3 6052 bp Feature: gene Location: 36510-36998 bp Feature: domain Description: NlpD Location: 36714-36990 bp Feature: domain Description: NlpD Location: 3 6714-3 6990 bp Feature: gene Location: 37569-38735 bp Feature: domain Description: ParM_like Location: 37635-38694 bp Feature: domain Description: ParM_like Location: 3 763 5-3 8694 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT beta_clamp (cl29549), RVT-GII, COG4712 (Uncharacterized protein ), rpsA (TIGR00717), nuc_hydro (cl00226), RVT_N (pfam13655), GIIM (pfam08388), NlpD (COG0739), ParM_like (cd10227)

Seq: NTMK01000072.1 Bacillus cereus strain HZBCE-07 scaffold_71, whole genome shotgun sequence (23757 bp)
Overview 1 RT 1: 181-3554 bp Neighborhood of RT #1 [181, 3850] RVT-GII HNHc B_ant_repeat Feature: gene Location: 181-2109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 502-1237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 502-1237 bp Feature: domain Description: HNHc Note: nucleases Location: 1828-1993 bp Feature: domain Description: HNHc Note: nucleases Location: 1828-1993 bp Feature: gene Location: 2863-3288 bp Feature: gene Location: 3266-3850 bp Feature: domain Description: B_ant_repeat Location: 3398-3554 bp Feature: domain Description: B_ant_repeat Location: 3398-3554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), B_ant_repeat (TIGR01451)