myRT

myRT report for GCA_002530675.1_ASM253067v1

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Seq: PCMX01000081.1 Flavobacterium columnare NBRC 100251 = ATCC 23463 WGS0041_contig_81, whole genome shotgun sequence (18634 bp)
Overview 1 RT 1: 4045-8492 bp Neighborhood of RT #1 [4045, 8492] RmuC RVT-UG2 Feature: gene Location: 4045-4413 bp Feature: gene Location: 4421-5791 bp Feature: domain Description: RmuC Location: 4535-5771 bp Feature: domain Description: RmuC Location: 4535-5771 bp Feature: gene Location: 5815-7323 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 6058-6928 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 6058-6928 bp Feature: gene Location: 7440-7667 bp Feature: gene Location: 7782-8492 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RmuC (pfam02646), RVT-UG2

Seq: PCMX01000094.1 Flavobacterium columnare NBRC 100251 = ATCC 23463 WGS0041_contig_94, whole genome shotgun sequence (4672 bp)
Overview 1 RT 1: 1939-3439 bp Neighborhood of RT #1 [1939, 4671] COG4185 COG4185 COG4898 COG4898 group_II_RT_mat RVT-UG19 Feature: gene Location: 1939-2298 bp Feature: domain Description: COG4185 Location: 1951-2137 bp Feature: domain Description: COG4185 Location: 1951-2 137 bp Feature: domain Description: COG4185 Location: 2140-2212 bp Feature: domain Description: COG4185 Location: 2 140-2 2 12 bp Feature: gene Location: 2334-2576 bp Feature: domain Description: COG4898 Location: 2346-2469 bp Feature: domain Description: COG4898 Location: 2 346-2 469 bp Feature: domain Description: COG4898 Location: 2472-2571 bp Feature: domain Description: COG4898 Location: 2 472 -2 571 bp Feature: gene Location: 2650-4671 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2680-2854 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2 680-2 854 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 2941-3439 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 2 941-3439 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4185 (Predicted ABC-type ATPase ), COG4898 (Uncharacterized protein ), group_II_RT_mat (TIGR04416), RVT-UG19