myRT

myRT report for GCA_002531355.1_ASM253135v1

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Seq: NWRY01000026.1 Escherichia coli strain OLC1334 OLC1334_Cont0026, whole genome shotgun sequence (70570 bp)
Overview 1 RT 1: 65485-69102 bp Neighborhood of RT #1 [65485, 69188] PRK11018 PRK09951 RVT-GII GIIM InsQ InsQ Feature: gene Location: 65485-65718 bp Feature: domain Description: PRK11018 Location: 65488-65716 bp Feature: domain Description: PRK1 1 01 8 Location: 65488-6571 6 bp Feature: gene Location: 65827-66498 bp Feature: domain Description: PRK09951 Location: 65830-66493 bp Feature: domain Description: PRK09951 Location: 65830-66493 bp Feature: gene Location: 66583-67953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66919-67531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6691 9-67531 bp Feature: domain Description: GIIM Note: maturase Location: 67591-67795 bp Feature: domain Description: GIIM Note: maturase Location: 67591 -67795 bp Feature: gene Location: 67950-68171 bp Feature: gene Location: 68370-69188 bp Feature: domain Description: InsQ Location: 68385-68811 bp Feature: domain Description: InsQ Location: 68385-6881 1 bp Feature: domain Description: InsQ Location: 68811-69102 bp Feature: domain Description: InsQ Location: 6881 1 -691 02 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11018 (putative sulfurtransferase YedF), PRK09951 (hypothetical protein; Provisional), RVT-GII, GIIM (pfam08388), InsQ (COG0675)

Seq: NWRY01000038.1 Escherichia coli strain OLC1334 OLC1334_Cont0038, whole genome shotgun sequence (44132 bp)
Overview 1 RT 1: 29161-31907 bp Neighborhood of RT #1 [29161, 31907] RVT-Retrons Feature: gene Location: 29161-29370 bp Feature: gene Location: 29380-29532 bp Feature: gene Location: 29719-30654 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29830-30415 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 9830-30415 bp Feature: gene Location: 30654-31616 bp Feature: gene Location: 31656-31907 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: NWRY01000074.1 Escherichia coli strain OLC1334 OLC1334_Cont0074, whole genome shotgun sequence (7154 bp)
Overview 1 RT 1: 981-4354 bp Neighborhood of RT #1 [981, 4354] HigB-like_toxin RVT-GII PinE Feature: gene Location: 981-1277 bp Feature: domain Description: HigB-like_toxin Location: 1005-1275 bp Feature: domain Description: HigB-like_toxin Location: 1005-1275 bp Feature: gene Location: 1198-1647 bp Feature: gene Location: 1759-2670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1963-2557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1963 -2557 bp Feature: gene Location: 3505-4083 bp Feature: domain Description: PinE Location: 3523-4075 bp Feature: domain Description: PinE Location: 3 523 -4075 bp Feature: gene Location: 4145-4354 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PinE (COG1961), HigB-like_toxin (pfam05015)

Seq: NWRY01000100.1 Escherichia coli strain OLC1334 OLC1334_Cont0100, whole genome shotgun sequence (2369 bp)
Overview 1 RT 1: 311-2293 bp Neighborhood of RT #1 [311, 2367] RVT-GII GIIM DDE_Tnp_1_assoc Feature: gene Location: 311-1810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 764-1421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 764 -14 21 bp Feature: domain Description: GIIM Note: maturase Location: 1511-1703 bp Feature: domain Description: GIIM Note: maturase Location: 1511-1703 bp Feature: gene Location: 2017-2367 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 2038-2293 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 2038-2293 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_assoc (pfam13808), RVT-GII, GIIM (pfam08388)