myRT

myRT report for GCA_002532375.1_ASM253237v1

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Seq: NITI01000001.1 Cronobacter sakazakii strain MOD1_KW1 CsakKW1_contig_1, whole genome shotgun sequence (558090 bp)
Overview 1 RT 1: 321690-326044 bp Neighborhood of RT #1 [321690, 326061] RVT-UG28 CbtA_toxin CbeA_antitoxin Feature: gene Location: 321690-322388 bp Feature: gene Location: 322482-322619 bp Feature: gene Location: 323534-325036 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 323822-324461 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 323822-324461 bp Feature: gene Location: 325340-325657 bp Feature: domain Description: CbtA_toxin Location: 325343-325649 bp Feature: domain Description: CbtA_toxin Location: 325343-325649 bp Feature: gene Location: 325696-326061 bp Feature: domain Description: CbeA_antitoxin Location: 325747-326044 bp Feature: domain Description: CbeA_antitoxin Location: 325747-326044 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28, CbtA_toxin (pfam06755), CbeA_antitoxin (pfam06154)

Seq: NITI01000005.1 Cronobacter sakazakii strain MOD1_KW1 CsakKW1_contig_5, whole genome shotgun sequence (2343984 bp)
Overview 1 RT 1: 2086807-2092150 bp Neighborhood of RT #1 [2086807, 2092347] FocA PRK09692 RVT-Retrons ABC_ATPase ABC_ATPase PRK10276 Feature: gene Location: 2086807-2087757 bp Feature: domain Description: FocA Location: 2086900-2087674 bp Feature: domain Description: FocA Location: 2 086900-2 087674 bp Feature: gene Location: 2088086-2089243 bp Feature: domain Description: PRK09692 Location: 2088092-2089229 bp Feature: domain Description: PRK09692 Location: 2 088092 -2 0892 2 9 bp Feature: gene Location: 2089637-2090608 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2089769-2090336 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 089769-2 090336 bp Feature: gene Location: 2090605-2091933 bp Feature: domain Description: ABC_ATPase Location: 2090653-2090752 bp Feature: domain Description: ABC_ATPase Location: 2 090653-2 090752 bp Feature: domain Description: ABC_ATPase Location: 2091148-2091343 bp Feature: domain Description: ABC_ATPase Location: 2 091148-2 091343 bp Feature: gene Location: 2092021-2092347 bp Feature: domain Description: PRK10276 Location: 2092027-2092150 bp Feature: domain Description: PRK102 76 Location: 2 092 02 7-2 092 150 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FocA (COG2116), PRK09692 (Integrase; provisional), RVT-Retrons, ABC_ATPase (pfam09818), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)