myRT

myRT report for GCA_002534785.1_ASM253478v1

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Seq: NKUU01000020.1 Escherichia coli strain MOD1-EC5925 MOD1-EC5925_20_length_92237_cov_27.1364, whole genome shotgun sequence (92237 bp)
Overview 1 RT 1: 70529-74889 bp Neighborhood of RT #1 [70529, 74891] D PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 70529-71629 bp Feature: domain Description: D Location: 70535-71618 bp Feature: domain Description: D Location: 70535-71 61 8 bp Feature: gene Location: 71720-71938 bp Feature: domain Description: PRK09678 Location: 71723-71921 bp Feature: domain Description: PRK09678 Location: 71 723-71 921 bp Feature: gene Location: 72342-73115 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 72477-72930 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 72477-72930 bp Feature: gene Location: 73801-74283 bp Feature: domain Description: SmpB Location: 73831-74278 bp Feature: domain Description: SmpB Location: 73831 -74278 bp Feature: gene Location: 74415-74891 bp Feature: domain Description: PRK10724 Location: 74421-74889 bp Feature: domain Description: PRK1 0724 Location: 74421 -74889 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT D (PHA02561), PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)

Seq: NKUU01000009.1 Escherichia coli strain MOD1-EC5925 MOD1-EC5925_9_length_184035_cov_27.699, whole genome shotgun sequence (184035 bp)
Overview 1 RT 1: 49264-53146 bp Neighborhood of RT #1 [49264, 53151] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 49264-49722 bp Feature: domain Description: dut Location: 49270-49717 bp Feature: domain Description: dut Location: 492 70-49717 bp Feature: gene Location: 49829-50425 bp Feature: domain Description: slmA Location: 49835-50411 bp Feature: domain Description: slmA Location: 49835-50411 bp Feature: gene Location: 50471-51430 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50606-51155 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50606-51155 bp Feature: gene Location: 51728-52384 bp Feature: domain Description: pyrE Location: 51746-52379 bp Feature: domain Description: pyrE Location: 51746-52 379 bp Feature: gene Location: 52435-53151 bp Feature: domain Description: rph Location: 52438-53146 bp Feature: domain Description: rph Location: 52 438-53146 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)