myRT

myRT report for GCA_002534895.1_ASM253489v1

Download annotations/find similar RTs

Seq: NKVA01000021.1 Escherichia coli strain MOD1-EC5915 MOD1-EC5915_21_length_73065_cov_35.9164, whole genome shotgun sequence (73065 bp)
Overview 1 RT 1: 227-5831 bp Neighborhood of RT #1 [227, 6058] SLATT_5 RVT-UG17 phage_tail_N Peptidase_S74 Feature: gene Location: 227-367 bp Feature: gene Location: 380-931 bp Feature: domain Description: SLATT_5 Location: 386-902 bp Feature: domain Description: SLATT_5 Location: 386-902 bp Feature: gene Location: 909-2279 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1137-1743 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 1 37-1 743 bp Feature: gene Location: 2360-2692 bp Feature: gene Location: 2717-6058 bp Feature: domain Description: phage_tail_N Location: 2720-3119 bp Feature: domain Description: phage_tail_N Location: 2720-31 1 9 bp Feature: domain Description: Peptidase_S74 Location: 5684-5831 bp Feature: domain Description: Peptidase_S74 Location: 5684-5831 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, phage_tail_N (pfam08400), Peptidase_S74 (pfam13884)

Seq: NKVA01000006.1 Escherichia coli strain MOD1-EC5915 MOD1-EC5915_6_length_283755_cov_37.1605, whole genome shotgun sequence (283755 bp)
Overview 1 RT 1: 197658-201540 bp Neighborhood of RT #1 [197658, 201545] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 197658-198116 bp Feature: domain Description: dut Location: 197664-198111 bp Feature: domain Description: dut Location: 197664-198111 bp Feature: gene Location: 198223-198819 bp Feature: domain Description: slmA Location: 198229-198805 bp Feature: domain Description: slmA Location: 1982 2 9-198805 bp Feature: gene Location: 198865-199824 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 199000-199549 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 199000-199549 bp Feature: gene Location: 200122-200778 bp Feature: domain Description: pyrE Location: 200140-200773 bp Feature: domain Description: pyrE Location: 2 00140-2 00773 bp Feature: gene Location: 200829-201545 bp Feature: domain Description: rph Location: 200832-201540 bp Feature: domain Description: rph Location: 2 00832 -2 01540 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)