myRT

myRT report for GCA_002534905.1_ASM253490v1

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Seq: NKUZ01000032.1 Escherichia coli strain MOD1-EC5916 MOD1-EC5916_32_length_35523_cov_22.2508, whole genome shotgun sequence (35523 bp)
Overview 1 RT 1: 16284-20388 bp Neighborhood of RT #1 [16284, 20402] InsG Transposase_20 RVT-GII GIIM rve_2 Feature: gene Location: 16284-16436 bp Feature: gene Location: 16463-17854 bp Feature: domain Description: InsG Location: 16466-17387 bp Feature: domain Description: InsG Location: 1 6466-1 7387 bp Feature: domain Description: Transposase_20 Location: 17510-17756 bp Feature: domain Description: Transposase_20 Location: 1 751 0-1 7756 bp Feature: gene Location: 18241-19629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18571-19189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8571 -1 91 89 bp Feature: domain Description: GIIM Note: maturase Location: 19237-19468 bp Feature: domain Description: GIIM Note: maturase Location: 1 9237-1 9468 bp Feature: gene Location: 19857-20174 bp Feature: gene Location: 20250-20402 bp Feature: domain Description: rve_2 Location: 20280-20388 bp Feature: domain Description: rve_2 Location: 20280-20388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsG (COG3385), Transposase_20 (pfam02371), RVT-GII, GIIM (pfam08388), rve_2 (pfam13333)

Seq: NKUZ01000040.1 Escherichia coli strain MOD1-EC5916 MOD1-EC5916_40_length_11551_cov_25.1895, whole genome shotgun sequence (11551 bp)
Overview 1 RT 1: 4833-7863 bp Neighborhood of RT #1 [4833, 7913] RVT-GII COG3547 COG3547 Feature: gene Location: 4833-5033 bp Feature: gene Location: 5041-5181 bp Feature: gene Location: 5215-6672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5623-6310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 562 3-6310 bp Feature: gene Location: 6911-7306 bp Feature: domain Description: COG3547 Location: 6929-7220 bp Feature: domain Description: COG3547 Location: 692 9-72 2 0 bp Feature: gene Location: 7365-7913 bp Feature: domain Description: COG3547 Location: 7377-7863 bp Feature: domain Description: COG3547 Location: 7377-7863 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, COG3547 (Transposase )

Seq: NKUZ01000043.1 Escherichia coli strain MOD1-EC5916 MOD1-EC5916_43_length_10984_cov_26.3461, whole genome shotgun sequence (10984 bp)
Overview 1 RT 1: 3494-10981 bp Neighborhood of RT #1 [3494, 10981] RVT-GII DDE_Tnp_IS66 HTH_23 InsE RVT-GII RVT-GII Feature: gene Location: 3494-3769 bp Feature: gene Location: 3965-4126 bp Feature: gene Location: 4208-4918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4409-4910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4409-4910 bp Feature: gene Location: 4913-5332 bp Feature: gene Location: 5370-5759 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5475-5718 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5475-5718 bp Feature: gene Location: 7178-7828 bp Feature: domain Description: HTH_23 Location: 7229-7328 bp Feature: domain Description: HTH_23 Location: 7229-73 28 bp Feature: domain Description: InsE Location: 7454-7805 bp Feature: domain Description: InsE Location: 7454-7805 bp Feature: gene Location: 8200-8403 bp Feature: gene Location: 8810-9184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8816-8987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8816-8987 bp Feature: gene Location: 9200-10012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9473-9929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9473 -9929 bp Feature: gene Location: 10133-10336 bp Feature: gene Location: 10523-10981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_Tnp_IS66 (pfam03050), HTH_23 (pfam13384), InsE (COG2963)