myRT

myRT report for GCA_002535515.1_ASM253551v1

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Seq: NMAP01000039.1 Escherichia coli strain MOD1-EC6256 MOD1-EC6256_39_length_38744_cov_22.1701, whole genome shotgun sequence (38666 bp)
Overview 1 RT 1: 33449-38343 bp Neighborhood of RT #1 [33449, 38393] COG3436 DDE_Tnp_IS66 RVT-GII GIIM HTH_23 DUF4007 Feature: gene Location: 33449-34486 bp Feature: domain Description: COG3436 Location: 33785-34265 bp Feature: domain Description: COG3436 Location: 33785-34265 bp Feature: gene Location: 34501-34917 bp Feature: domain Description: DDE_Tnp_IS66 Location: 34504-34876 bp Feature: domain Description: DDE_Tnp_IS66 Location: 34504-34876 bp Feature: gene Location: 35379-36611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35583-36234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35583-36234 bp Feature: domain Description: GIIM Note: maturase Location: 36312-36534 bp Feature: domain Description: GIIM Note: maturase Location: 3631 2-36534 bp Feature: gene Location: 36877-37230 bp Feature: domain Description: HTH_23 Location: 36949-37033 bp Feature: domain Description: HTH_23 Location: 36949-37033 bp Feature: gene Location: 37443-38393 bp Feature: domain Description: DUF4007 Location: 37485-38343 bp Feature: domain Description: DUF4007 Location: 37485-38343 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3436 (Transposase ), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), HTH_23 (pfam13384), DUF4007 (pfam13182)