myRT

myRT report for GCA_002537685.1_ASM253768v1

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Seq: NMKB01000031.1 Escherichia coli strain MOD1-EC6059 MOD1-EC6059_31_length_53744_cov_31.4315, whole genome shotgun sequence (53744 bp)
Overview 1 RT 1: 44135-47742 bp Neighborhood of RT #1 [44135, 47742] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 44135-44263 bp Feature: gene Location: 44113-44592 bp Feature: domain Description: PHA02517 Location: 44173-44527 bp Feature: domain Description: PHA0251 7 Location: 441 73-44527 bp Feature: gene Location: 45184-46707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45457-46189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45457-461 89 bp Feature: domain Description: GIIM Note: maturase Location: 46264-46462 bp Feature: domain Description: GIIM Note: maturase Location: 46264-46462 bp Feature: gene Location: 46803-47276 bp Feature: domain Description: PHA02517 Location: 46809-47265 bp Feature: domain Description: PHA0251 7 Location: 46809-47265 bp Feature: gene Location: 47359-47742 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NMKB01000084.1 Escherichia coli strain MOD1-EC6059 MOD1-EC6059_84_length_3825_cov_41.8877, whole genome shotgun sequence (3825 bp)
Overview 1 RT 1: 19-3816 bp Neighborhood of RT #1 [19, 3824] Antirestrict DUF932 RVT-GII Intron_maturas2 HNHc DUF932 Feature: gene Location: 19-504 bp Feature: domain Description: Antirestrict Location: 217-502 bp Feature: domain Description: Antirestrict Location: 2 17-502 bp Feature: gene Location: 594-980 bp Feature: domain Description: DUF932 Location: 600-945 bp Feature: domain Description: DUF932 Location: 600-945 bp Feature: gene Location: 1153-2931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1414-2209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1414-2 2 09 bp Feature: domain Description: Intron_maturas2 Location: 2335-2560 bp Feature: domain Description: Intron_maturas2 Location: 2 335-2 560 bp Feature: domain Description: HNHc Note: nucleases Location: 2755-2905 bp Feature: domain Description: HNHc Note: nucleases Location: 2 755-2 905 bp Feature: gene Location: 3423-3824 bp Feature: domain Description: DUF932 Location: 3534-3816 bp Feature: domain Description: DUF932 Location: 3534-3816 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Antirestrict (pfam03230), DUF932 (pfam06067)