myRT

myRT report for GCA_002537695.1_ASM253769v1

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Seq: NMDQ01000140.1 Escherichia coli strain MOD1-EC6057 MOD1-EC6057_140_length_2850_cov_6.90263, whole genome shotgun sequence (2850 bp)
Overview 1 RT 1: 91-2741 bp Neighborhood of RT #1 [91, 2746] PRK10276 RVT-GII InsA Feature: gene Location: 91-432 bp Feature: domain Description: PRK10276 Location: 94-415 bp Feature: domain Description: PRK1 0276 Location: 94-41 5 bp Feature: gene Location: 660-827 bp Feature: gene Location: 833-2320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1238-1928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 238-1 928 bp Feature: gene Location: 2471-2746 bp Feature: domain Description: InsA Location: 2474-2741 bp Feature: domain Description: InsA Location: 2474-2741 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsA (COG3677), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: NMDQ01000176.1 Escherichia coli strain MOD1-EC6057 MOD1-EC6057_176_length_1309_cov_306.685, whole genome shotgun sequence (1309 bp)
Overview 1 RT 1: 1-1305 bp Neighborhood of RT #1 [1, 1307] RVT-GII Feature: gene Location: 1-363 bp Feature: gene Location: 657-1307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1305 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NMDQ01000190.1 Escherichia coli strain MOD1-EC6057 MOD1-EC6057_190_length_971_cov_283.63, whole genome shotgun sequence (971 bp)
Overview 1 RT 1: 93-744 bp Neighborhood of RT #1 [93, 968] RVT-GII GIIM Feature: gene Location: 93-968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99-450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99-450 bp Feature: domain Description: GIIM Note: maturase Location: 525-744 bp Feature: domain Description: GIIM Note: maturase Location: 525-744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NMDQ01000003.1 Escherichia coli strain MOD1-EC6057 MOD1-EC6057_3_length_251530_cov_28.2713, whole genome shotgun sequence (251530 bp)
Overview 1 RT 1: 116414-122420 bp Neighborhood of RT #1 [116414, 122425] DinI RVT-Retrons Q P Feature: gene Location: 116414-116647 bp Feature: domain Description: DinI Location: 116456-116642 bp Feature: domain Description: DinI Location: 1164 56-11664 2 bp Feature: gene Location: 116840-117175 bp Feature: gene Location: 117821-119578 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 117965-118586 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 117965-118586 bp Feature: gene Location: 119628-120659 bp Feature: domain Description: Q Location: 119631-120654 bp Feature: domain Description: Q Location: 119631-120654 bp Feature: gene Location: 120659-122425 bp Feature: domain Description: P Location: 120686-122420 bp Feature: domain Description: P Location: 120686-1224 20 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-Retrons, Q (PHA02536), P (PHA02535)