myRT

myRT report for GCA_002542155.1_ASM254215v1

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Seq: NMEE01000152.1 Escherichia coli strain MOD1-EC6038 MOD1-EC6038_152_length_3456_cov_13.9695, whole genome shotgun sequence (3456 bp)
Overview 1 RT 1: 1277-3454 bp Neighborhood of RT #1 [1277, 3453] RVT-GII Intron_maturas2 Feature: gene Location: 1277-1459 bp Feature: gene Location: 1688-1897 bp Feature: gene Location: 2032-3453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2299-3130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2299-31 30 bp Feature: domain Description: Intron_maturas2 Location: 3244-3454 bp Feature: domain Description: Intron_maturas2 Location: 3244-3454 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: NMEE01000157.1 Escherichia coli strain MOD1-EC6038 MOD1-EC6038_157_length_2869_cov_11.9563, whole genome shotgun sequence (2869 bp)
Overview 1 RT 1: 120-2582 bp Neighborhood of RT #1 [120, 2809] DDE_Tnp_IS66 DDE_Tnp_IS66_C PHA02517 RVT-GII Feature: gene Location: 120-638 bp Feature: domain Description: DDE_Tnp_IS66 Location: 138-483 bp Feature: domain Description: DDE_Tnp_IS66 Location: 138-483 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 504-615 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 504-615 bp Feature: gene Location: 773-985 bp Feature: domain Description: PHA02517 Location: 776-920 bp Feature: domain Description: PHA02 517 Location: 776-92 0 bp Feature: gene Location: 1577-2809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1850-2582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1850-2 582 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII

Seq: NMEE01000018.1 Escherichia coli strain MOD1-EC6038 MOD1-EC6038_18_length_69032_cov_22.1463, whole genome shotgun sequence (69032 bp)
Overview 1 RT 1: 41095-46460 bp Neighborhood of RT #1 [41095, 46495] RVT-UG7 PRK09692 proA Feature: gene Location: 41095-41235 bp Feature: gene Location: 41345-42085 bp Feature: gene Location: 42082-43710 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 42490-42919 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 42490-42919 bp Feature: gene Location: 43703-44887 bp Feature: domain Description: PRK09692 Location: 43709-44864 bp Feature: domain Description: PRK09692 Location: 43 709-44864 bp Feature: gene Location: 45242-46495 bp Feature: domain Description: proA Location: 45269-46460 bp Feature: domain Description: proA Location: 45269-46460 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK09692 (Integrase; provisional), proA (TIGR00407)