myRT

myRT report for GCA_002544745.1_ASM254474v1

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Seq: NMHJ01000021.1 Escherichia coli strain MOD1-EC5938 MOD1-EC5938_21_length_79344_cov_29.3081, whole genome shotgun sequence (79344 bp)
Overview 1 RT 1: 17222-22716 bp Neighborhood of RT #1 [17222, 22751] RVT-UG7 PRK09692 proA Feature: gene Location: 17222-17491 bp Feature: gene Location: 17601-18341 bp Feature: gene Location: 18338-19966 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 18746-19175 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1 8746-1 91 75 bp Feature: gene Location: 19959-21143 bp Feature: domain Description: PRK09692 Location: 19965-21120 bp Feature: domain Description: PRK09692 Location: 1 9965-21 1 20 bp Feature: gene Location: 21498-22751 bp Feature: domain Description: proA Location: 21525-22716 bp Feature: domain Description: proA Location: 21 525-2271 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK09692 (Integrase; provisional), proA (TIGR00407)

Seq: NMHJ01000085.1 Escherichia coli strain MOD1-EC5938 MOD1-EC5938_85_length_2272_cov_184.666, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)