myRT

myRT report for GCA_002545985.1_ASM254598v1

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Seq: NOAU01000023.1 Escherichia coli strain MOD1-EC5850 MOD1-EC5850_23_length_76229_cov_22.1435, whole genome shotgun sequence (76229 bp)
Overview 1 RT 1: 24433-30442 bp Neighborhood of RT #1 [24433, 30447] PRK09692 RVT-UG8 RVT-UG3 Psu Feature: gene Location: 24433-24600 bp Feature: gene Location: 25060-26256 bp Feature: domain Description: PRK09692 Location: 25063-26245 bp Feature: domain Description: PRK09692 Location: 25063-26245 bp Feature: gene Location: 26404-28356 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 26932-27385 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 26932-27385 bp Feature: gene Location: 28349-29194 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 28355-28715 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 28355-2871 5 bp Feature: gene Location: 29206-29610 bp Feature: gene Location: 29881-30447 bp Feature: domain Description: Psu Location: 29902-30442 bp Feature: domain Description: Psu Location: 29902-30442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-UG8, RVT-UG3, Psu (pfam07455)

Seq: NOAU01000087.1 Escherichia coli strain MOD1-EC5850 MOD1-EC5850_87_length_2424_cov_19.1304, whole genome shotgun sequence (2424 bp)
Overview 1 RT 1: 734-2012 bp Neighborhood of RT #1 [734, 2257] RVT-GII GIIM Feature: gene Location: 734-2257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1007-1739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1007-1739 bp Feature: domain Description: GIIM Note: maturase Location: 1814-2012 bp Feature: domain Description: GIIM Note: maturase Location: 1814-2 012 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)