myRT

myRT report for GCA_002546095.1_ASM254609v1

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Seq: NOAY01000064.1 Escherichia coli strain MOD1-EC5846 MOD1-EC5846_64_length_22316_cov_64.3904, whole genome shotgun sequence (22316 bp)
Overview 1 RT 1: 19220-21709 bp Neighborhood of RT #1 [19220, 21774] RVT-GII Inovirus_Gp2 Feature: gene Location: 19220-19393 bp Feature: gene Location: 19427-19735 bp Feature: gene Location: 19722-20885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19836-20523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9836-20523 bp Feature: gene Location: 21211-21774 bp Feature: domain Description: Inovirus_Gp2 Location: 21268-21709 bp Feature: domain Description: Inovirus_Gp2 Location: 21 268-21 709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Inovirus_Gp2 (pfam11726)

Seq: NOAY01000095.1 Escherichia coli strain MOD1-EC5846 MOD1-EC5846_95_length_8956_cov_73.8376, whole genome shotgun sequence (8956 bp)
Overview 1 RT 1: 5193-8605 bp Neighborhood of RT #1 [5193, 8613] InsE PHA02517 RVT-GII GIIM Tra5 Feature: gene Location: 5193-5492 bp Feature: domain Description: InsE Location: 5223-5487 bp Feature: domain Description: InsE Location: 52 2 3-5487 bp Feature: gene Location: 5489-5956 bp Feature: domain Description: PHA02517 Location: 5555-5894 bp Feature: domain Description: PHA02 517 Location: 5555-5894 bp Feature: gene Location: 6548-7789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6821-7553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 682 1-7553 bp Feature: domain Description: GIIM Note: maturase Location: 7628-7784 bp Feature: domain Description: GIIM Note: maturase Location: 762 8-7784 bp Feature: gene Location: 7841-8071 bp Feature: gene Location: 8182-8613 bp Feature: domain Description: Tra5 Location: 8188-8605 bp Feature: domain Description: Tra5 Location: 8188-8605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Tra5 (COG2801)