myRT

myRT report for GCA_002546325.1_ASM254632v1

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Seq: NOBO01000081.1 Escherichia coli strain MOD1-EC5826 MOD1-EC5826_81_length_10118_cov_55.9137, whole genome shotgun sequence (10118 bp)
Overview 1 RT 1: 2312-9673 bp Neighborhood of RT #1 [2312, 9768] PAAR_2 RhsA RHS_repeat RhsA RhsA RVT-GII GIIM Feature: gene Location: 2312-6532 bp Feature: domain Description: PAAR_2 Location: 2318-2399 bp Feature: domain Description: PAAR_2 Location: 231 8-2399 bp Feature: domain Description: RhsA Location: 2897-3344 bp Feature: domain Description: RhsA Location: 2897-3344 bp Feature: domain Description: RHS_repeat Location: 3407-3497 bp Feature: domain Description: RHS_repeat Location: 3407-3497 bp Feature: domain Description: RhsA Location: 3566-3902 bp Feature: domain Description: RhsA Location: 3566-3902 bp Feature: domain Description: RhsA Location: 3929-6098 bp Feature: domain Description: RhsA Location: 3929-6098 bp Feature: gene Location: 7546-7920 bp Feature: gene Location: 8269-9768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8722-9379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8722-9379 bp Feature: domain Description: GIIM Note: maturase Location: 9463-9673 bp Feature: domain Description: GIIM Note: maturase Location: 9463-9673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAAR_2 (cd14738), RhsA (COG3209), RHS_repeat (pfam05593), RVT-GII, GIIM (pfam08388)