myRT

myRT report for GCA_002547695.1_ASM254769v1

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Seq: NNZX01000029.1 Escherichia coli strain MOD1-EC5875 MOD1-EC5875_29_length_21518_cov_52.2484, whole genome shotgun sequence (21518 bp)
Overview 1 RT 1: 1167-5282 bp Neighborhood of RT #1 [1167, 5282] rve_2 RVT-GII GIIM InsG Transposase_20 Feature: gene Location: 1167-1319 bp Feature: domain Description: rve_2 Location: 1197-1305 bp Feature: domain Description: rve_2 Location: 1 1 97-1 305 bp Feature: gene Location: 1592-1897 bp Feature: gene Location: 1940-3328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2270-2888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2270-2888 bp Feature: domain Description: GIIM Note: maturase Location: 2936-3167 bp Feature: domain Description: GIIM Note: maturase Location: 2936-31 67 bp Feature: gene Location: 3715-5106 bp Feature: domain Description: InsG Location: 3718-4639 bp Feature: domain Description: InsG Location: 371 8-4639 bp Feature: domain Description: Transposase_20 Location: 4762-5008 bp Feature: domain Description: Transposase_20 Location: 4762-5008 bp Feature: gene Location: 5115-5282 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve_2 (pfam13333), RVT-GII, GIIM (pfam08388), InsG (COG3385), Transposase_20 (pfam02371)

Seq: NNZX01000054.1 Escherichia coli strain MOD1-EC5875 MOD1-EC5875_54_length_4671_cov_50.9937, whole genome shotgun sequence (4671 bp)
Overview 1 RT 1: 1179-4542 bp Neighborhood of RT #1 [1179, 4565] COG3436 DDE_Tnp_IS66 RVT-GII GIIM DDE_Tnp_IS66_C Feature: gene Location: 1179-2255 bp Feature: domain Description: COG3436 Location: 1491-1962 bp Feature: domain Description: COG3436 Location: 1491-1962 bp Feature: gene Location: 2231-2620 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2336-2579 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 336-2 579 bp Feature: gene Location: 3072-3782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3273-3774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 73-3774 bp Feature: gene Location: 3931-4302 bp Feature: domain Description: GIIM Note: maturase Location: 4003-4225 bp Feature: domain Description: GIIM Note: maturase Location: 4003-42 2 5 bp Feature: gene Location: 4419-4565 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4431-4542 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4431-4542 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3436 (Transposase ), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817)

Seq: NNZX01000074.1 Escherichia coli strain MOD1-EC5875 MOD1-EC5875_74_length_2403_cov_60.6354, whole genome shotgun sequence (2403 bp)
Overview 1 RT 1: 3-2326 bp Neighborhood of RT #1 [3, 2326] RVT-GII RVT-GII Feature: gene Location: 3-242 bp Feature: gene Location: 488-862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 494-665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 494-665 bp Feature: gene Location: 878-1690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1151-1607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1151-1607 bp Feature: gene Location: 2093-2326 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII