myRT

myRT report for GCA_002549495.1_ASM254949v1

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Seq: NOCS01000116.1 Escherichia coli strain MOD1-EC5789 MOD1-EC5789_116_length_7759_cov_181.275, whole genome shotgun sequence (7759 bp)
Overview 1 RT 1: 4166-7578 bp Neighborhood of RT #1 [4166, 7586] InsE PHA02517 RVT-GII GIIM Tra5 Feature: gene Location: 4166-4465 bp Feature: domain Description: InsE Location: 4196-4460 bp Feature: domain Description: InsE Location: 41 96-4460 bp Feature: gene Location: 4462-4929 bp Feature: domain Description: PHA02517 Location: 4528-4867 bp Feature: domain Description: PHA0251 7 Location: 4528-4867 bp Feature: gene Location: 5521-6762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5794-6526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5794-6526 bp Feature: domain Description: GIIM Note: maturase Location: 6601-6757 bp Feature: domain Description: GIIM Note: maturase Location: 6601 -6757 bp Feature: gene Location: 6814-7044 bp Feature: gene Location: 7155-7586 bp Feature: domain Description: Tra5 Location: 7161-7578 bp Feature: domain Description: Tra5 Location: 71 61 -7578 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Tra5 (COG2801)

Seq: NOCS01000079.1 Escherichia coli strain MOD1-EC5789 MOD1-EC5789_79_length_17785_cov_171.381, whole genome shotgun sequence (17785 bp)
Overview 1 RT 1: 75-1512 bp Neighborhood of RT #1 [75, 1512] RVT-GII Feature: gene Location: 75-1010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 189-876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 189-876 bp Feature: gene Location: 997-1305 bp Feature: gene Location: 1339-1512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII