myRT

myRT report for GCA_002550095.1_ASM255009v1

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Seq: NVPK01000019.1 Bacillus pseudomycoides strain AFS099456 AFS099456_115_B5_Contig19_140618, whole genome shotgun sequence (53209 bp)
Overview 1 RT 1: 45625-50955 bp Neighborhood of RT #1 [45625, 50963] DUF4352 DUF5105 RVT-GII MFS_MefA_like RimL Feature: gene Location: 45625-46680 bp Feature: domain Description: DUF4352 Location: 45739-46060 bp Feature: domain Description: DUF4352 Location: 45739-46060 bp Feature: domain Description: DUF5105 Location: 46126-46675 bp Feature: domain Description: DUF51 05 Location: 461 26-46675 bp Feature: gene Location: 46808-46966 bp Feature: gene Location: 47139-47636 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47343-47457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47343-47457 bp Feature: gene Location: 48652-49911 bp Feature: domain Description: MFS_MefA_like Location: 48700-49840 bp Feature: domain Description: MFS_MefA_like Location: 48700-49840 bp Feature: gene Location: 50409-50963 bp Feature: domain Description: RimL Location: 50436-50955 bp Feature: domain Description: RimL Location: 50436-50955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4352 (pfam11611), DUF5105 (pfam17118), RVT-GII, MFS_MefA_like (cd06173), RimL (COG1670)

Seq: NVPK01000024.1 Bacillus pseudomycoides strain AFS099456 AFS099456_115_B5_Contig24_140618, whole genome shotgun sequence (34634 bp)
Overview 1 RT 1: 10099-14238 bp Neighborhood of RT #1 [10099, 14240] DDE_Tnp_1 RVT-GII GIIM RimL Feature: gene Location: 10099-11157 bp Feature: domain Description: DDE_Tnp_1 Location: 10459-11143 bp Feature: domain Description: DDE_Tnp_1 Location: 10459-11143 bp Feature: gene Location: 11309-11488 bp Feature: gene Location: 11783-12970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11948-12587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11948-12 587 bp Feature: domain Description: GIIM Note: maturase Location: 12662-12887 bp Feature: domain Description: GIIM Note: maturase Location: 12 662 -12 887 bp Feature: gene Location: 13306-13500 bp Feature: gene Location: 13734-14240 bp Feature: domain Description: RimL Location: 13746-14238 bp Feature: domain Description: RimL Location: 13746-142 38 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), RimL (COG1670)

Seq: NVPK01000072.1 Bacillus pseudomycoides strain AFS099456 AFS099456_115_B5_Contig72_140618, whole genome shotgun sequence (12926 bp)
Overview 1 RT 1: 6776-12856 bp Neighborhood of RT #1 [6776, 12856] TraC-F-type TraC-F-type Lysozyme_like RVT-GII HNHc Lysozyme_like Spr Feature: gene Location: 6776-8716 bp Feature: domain Description: TraC-F-type Location: 7142-7730 bp Feature: domain Description: TraC-F-type Location: 7142-773 0 bp Feature: domain Description: TraC-F-type Location: 8084-8606 bp Feature: domain Description: TraC-F-type Location: 8084-8606 bp Feature: gene Location: 8720-9220 bp Feature: domain Description: Lysozyme_like Location: 8906-9203 bp Feature: domain Description: Lysozyme_like Location: 8906-9203 bp Feature: gene Location: 10003-11772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10249-10954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10249-10954 bp Feature: domain Description: HNHc Note: nucleases Location: 11515-11650 bp Feature: domain Description: HNHc Note: nucleases Location: 11515-11650 bp Feature: gene Location: 11785-12519 bp Feature: domain Description: Lysozyme_like Location: 11884-12076 bp Feature: domain Description: Lysozyme_like Location: 11884-12076 bp Feature: domain Description: Spr Location: 12112-12502 bp Feature: domain Description: Spr Location: 12112-12502 bp Feature: gene Location: 12554-12856 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Lysozyme_like (pfam13702), Spr (COG0791), TraC-F-type (TIGR02746)