myRT

myRT report for GCA_002550595.1_ASM255059v1

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Seq: NVMJ01000116.1 Bacillus cereus strain AFS094413 AFS094413_110_H7_Contig116_140523, whole genome shotgun sequence (20883 bp)
Overview 1 RT 1: 3244-8711 bp Neighborhood of RT #1 [3244, 8728] CwlT_like NlpD Spr RVT-GII HNHc CwlT_like Feature: gene Location: 3244-3819 bp Feature: gene Location: 3836-4939 bp Feature: domain Description: CwlT_like Location: 3866-4052 bp Feature: domain Description: CwlT_like Location: 3866-4052 bp Feature: domain Description: NlpD Location: 4079-4511 bp Feature: domain Description: NlpD Location: 4079-451 1 bp Feature: domain Description: Spr Location: 4547-4880 bp Feature: domain Description: Spr Location: 4547-4880 bp Feature: gene Location: 5005-6801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5263-5968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5263-5968 bp Feature: domain Description: HNHc Note: nucleases Location: 6529-6664 bp Feature: domain Description: HNHc Note: nucleases Location: 6529-6664 bp Feature: gene Location: 7113-7331 bp Feature: gene Location: 7574-8728 bp Feature: domain Description: CwlT_like Location: 8426-8711 bp Feature: domain Description: CwlT_like Location: 8426-871 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CwlT_like, NlpD (COG0739), Spr (COG0791), RVT-GII, HNHc (smart00507)

Seq: NVMJ01000022.1 Bacillus cereus strain AFS094413 AFS094413_110_H7_Contig22_140523, whole genome shotgun sequence (27246 bp)
Overview 1 RT 1: 11989-19438 bp Neighborhood of RT #1 [11989, 19617] RVT-GII Intron_maturas2 HNHc TraG-D_C Ftsk_gamma Ftsk_gamma rpsA Feature: gene Location: 11989-12462 bp Feature: gene Location: 12480-13991 bp Feature: gene Location: 14691-16400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14853-15675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14853-15675 bp Feature: domain Description: Intron_maturas2 Location: 15756-16050 bp Feature: domain Description: Intron_maturas2 Location: 15756-16050 bp Feature: domain Description: HNHc Note: nucleases Location: 16197-16371 bp Feature: domain Description: HNHc Note: nucleases Location: 16197-16371 bp Feature: gene Location: 16594-18375 bp Feature: domain Description: TraG-D_C Location: 16645-17005 bp Feature: domain Description: TraG-D_C Location: 16645-17005 bp Feature: domain Description: Ftsk_gamma Location: 17365-17545 bp Feature: domain Description: Ftsk_gamma Location: 17365-17545 bp Feature: domain Description: Ftsk_gamma Location: 17698-17872 bp Feature: domain Description: Ftsk_gamma Location: 17698-17872 bp Feature: gene Location: 18634-19617 bp Feature: domain Description: rpsA Location: 18901-19438 bp Feature: domain Description: rpsA Location: 18901-19438 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), rpsA (TIGR00717)

Seq: NVMJ01000074.1 Bacillus cereus strain AFS094413 AFS094413_110_H7_Contig74_140523, whole genome shotgun sequence (33751 bp)
Overview 1 RT 1: 21552-24534 bp Neighborhood of RT #1 [21552, 24534] RVT-GII GIIM Feature: gene Location: 21552-21731 bp Feature: gene Location: 21904-22170 bp Feature: gene Location: 22437-23744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22722-23361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22722-23 3 61 bp Feature: domain Description: GIIM Note: maturase Location: 23436-23661 bp Feature: domain Description: GIIM Note: maturase Location: 23 43 6-23 661 bp Feature: gene Location: 23918-24097 bp Feature: gene Location: 24361-24534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)