myRT

myRT report for GCA_002550775.1_ASM255077v1

Download annotations/find similar RTs

Seq: NVMY01000151.1 Bacillus cereus strain AFS092659 AFS092659_105_G10_Contig151_140523, whole genome shotgun sequence (5083 bp)
Overview 1 RT 1: 877-4769 bp Neighborhood of RT #1 [877, 4769] RVT-GII RVT-GII GIIM RVT-GII GIIM HNHc Feature: gene Location: 877-1536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1042-1516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 042-1 51 6 bp Feature: gene Location: 2060-3322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2264-2921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2264-2921 bp Feature: domain Description: GIIM Note: maturase Location: 3002-3230 bp Feature: domain Description: GIIM Note: maturase Location: 3002-3230 bp Feature: gene Location: 3419-4291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3428-3527 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3428-3527 bp Feature: domain Description: GIIM Note: maturase Location: 3590-3824 bp Feature: domain Description: GIIM Note: maturase Location: 3590-3824 bp Feature: domain Description: HNHc Note: nucleases Location: 4025-4196 bp Feature: domain Description: HNHc Note: nucleases Location: 4025-41 96 bp Feature: gene Location: 4394-4534 bp Feature: gene Location: 4623-4769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NVMY01000017.1 Bacillus cereus strain AFS092659 AFS092659_105_G10_Contig17_140523, whole genome shotgun sequence (3129 bp)
Overview 1 RT 1: 592-3128 bp Neighborhood of RT #1 [592, 3127] RVT-GII Rve Feature: gene Location: 592-780 bp Feature: gene Location: 796-1104 bp Feature: gene Location: 2243-2653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2552-2630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 552 -2 630 bp Feature: gene Location: 2798-3127 bp Feature: domain Description: Rve Location: 2801-3128 bp Feature: domain Description: Rve Location: 2 801-312 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Rve (COG3316)

Seq: NVMY01000026.1 Bacillus cereus strain AFS092659 AFS092659_105_G10_Contig26_140523, whole genome shotgun sequence (6295 bp)
Overview 1 RT 1: 1022-5905 bp Neighborhood of RT #1 [1022, 5905] delta_endotoxin_C Endotoxin_C2 Cry1Ac_D5 Cry1Ac_D5 RVT-GII Feature: gene Location: 1022-2728 bp Feature: domain Description: delta_endotoxin_C Location: 1046-2069 bp Feature: domain Description: delta_endotoxin_C Location: 1046-2069 bp Feature: domain Description: Endotoxin_C2 Location: 2102-2285 bp Feature: domain Description: Endotoxin_C2 Location: 2102-2285 bp Feature: domain Description: Cry1Ac_D5 Location: 2309-2600 bp Feature: domain Description: Cry1Ac_D5 Location: 23 09-2600 bp Feature: gene Location: 2737-3810 bp Feature: domain Description: Cry1Ac_D5 Location: 2806-2998 bp Feature: domain Description: Cry1Ac_D5 Location: 2806-2998 bp Feature: gene Location: 4710-4919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4716-4905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4716-4905 bp Feature: gene Location: 4933-5088 bp Feature: gene Location: 5600-5905 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT delta_endotoxin_C (cd04085), Endotoxin_C2 (pfam18449), Cry1Ac_D5 (pfam17997), RVT-GII

Seq: NVMY01000073.1 Bacillus cereus strain AFS092659 AFS092659_105_G10_Contig73_140523, whole genome shotgun sequence (2695 bp)
Overview 1 RT 1: 90-1827 bp Neighborhood of RT #1 [90, 1955] RVT-GII HNHc Feature: gene Location: 90-1955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 411-1137 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 11-1137 bp Feature: domain Description: HNHc Note: nucleases Location: 1689-1827 bp Feature: domain Description: HNHc Note: nucleases Location: 1689-1827 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NVMY01000082.1 Bacillus cereus strain AFS092659 AFS092659_105_G10_Contig82_140523, whole genome shotgun sequence (26182 bp)
Overview 1 RT 1: 2713-8923 bp 2 RT 2: 12038-17856 bp 3 RT 3: 20581-25255 bp Neighborhood of RT #1 [2713, 9144] RVT-GII Replic_Relax Neighborhood of RT #2 [12038, 17856] TraC-F-type RVT-GII HNHc AAA_10 Neighborhood of RT #3 [20581, 25255] Glucosaminidase NlpD RVT-GII Intron_maturas2 HNHc NlpD Feature: gene Location: 2713-4575 bp Feature: gene Location: 4788-4931 bp Feature: gene Location: 5345-7234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5645-6353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 645 -635 3 bp Feature: gene Location: 7361-8296 bp Feature: gene Location: 8302-9144 bp Feature: domain Description: Replic_Relax Location: 8344-8923 bp Feature: domain Description: Replic_Relax Location: 8344-8923 bp Feature: gene Location: 12038-13645 bp Feature: domain Description: TraC-F-type Location: 12824-13619 bp Feature: domain Description: TraC-F-type Location: 12824-13619 bp Feature: gene Location: 13851-14021 bp Feature: gene Location: 14377-16191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14677-15382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14677-15 382 bp Feature: domain Description: HNHc Note: nucleases Location: 16003-16066 bp Feature: domain Description: HNHc Note: nucleases Location: 16003-16066 bp Feature: gene Location: 16212-17288 bp Feature: domain Description: AAA_10 Location: 16317-17241 bp Feature: domain Description: AAA_10 Location: 16317-17241 bp Feature: gene Location: 17332-17856 bp Feature: gene Location: 20581-20979 bp Feature: gene Location: 21006-21926 bp Feature: domain Description: Glucosaminidase Location: 21318-21558 bp Feature: domain Description: Glucosaminidase Location: 21318-215 5 8 bp Feature: domain Description: NlpD Location: 21711-21918 bp Feature: domain Description: NlpD Location: 21711-21918 bp Feature: gene Location: 22488-24320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22755-23589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2275 5 -235 89 bp Feature: domain Description: Intron_maturas2 Location: 23655-24033 bp Feature: domain Description: Intron_maturas2 Location: 2365 5 -24033 bp Feature: domain Description: HNHc Note: nucleases Location: 24099-24264 bp Feature: domain Description: HNHc Note: nucleases Location: 24099-24264 bp Feature: gene Location: 24377-24646 bp Feature: domain Description: NlpD Location: 24425-24644 bp Feature: domain Description: NlpD Location: 24425 -24644 bp Feature: gene Location: 24671-25255 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Replic_Relax (pfam13814), TraC-F-type (TIGR02746), HNHc (smart00507), AAA_10 (pfam12846), Glucosaminidase (pfam01832), NlpD (COG0739), Intron_maturas2 (pfam01348)