myRT

myRT report for GCA_002551815.1_ASM255181v1

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Seq: NVPR01000105.1 (2816 bp)
Overview 1 RT 1: 712-1999 bp Neighborhood of RT #1 [712, 2586] RVT-GII GIIM Feature: gene Location: 712-2586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1012-1717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 2-1 71 7 bp Feature: domain Description: GIIM Note: maturase Location: 1831-1999 bp Feature: domain Description: GIIM Note: maturase Location: 1 831 -1 999 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NVPR01000045.1 (84235 bp)
Overview 1 RT 1: 16861-26937 bp Neighborhood of RT #1 [16861, 26942] gerPA addA_Gpos RVT-GII Intron_maturas2 HNHc addA_Gpos addB_Gpos Feature: gene Location: 16861-17082 bp Feature: domain Description: gerPA Location: 16870-17074 bp Feature: domain Description: gerPA Location: 16870-17074 bp Feature: gene Location: 17177-19486 bp Feature: domain Description: addA_Gpos Location: 17180-19472 bp Feature: domain Description: addA_Gpos Location: 17180-19472 bp Feature: gene Location: 19675-21516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19963-20794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19963-2 0794 bp Feature: domain Description: Intron_maturas2 Location: 20968-21166 bp Feature: domain Description: Intron_maturas2 Location: 2 0968-2 1166 bp Feature: domain Description: HNHc Note: nucleases Location: 21340-21493 bp Feature: domain Description: HNHc Note: nucleases Location: 2 1340-2 1493 bp Feature: gene Location: 22078-23430 bp Feature: domain Description: addA_Gpos Location: 22117-23422 bp Feature: domain Description: addA_Gpos Location: 2 2 117-2 342 2 bp Feature: gene Location: 23427-26942 bp Feature: domain Description: addB_Gpos Location: 23430-26937 bp Feature: domain Description: addB_Gpos Location: 2 3430-2 6937 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT gerPA (pfam10676), addA_Gpos (TIGR02785), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), addB_Gpos (TIGR02773)

Seq: NVPR01000163.1 (62699 bp)
Overview 1 RT 1: 28394-33998 bp Neighborhood of RT #1 [28394, 33998] Arm-DNA-bind_4 Phage_int_SAM_3 INT_ICEBs1_C_like RVT-UG15 INT_C_like_3 Feature: gene Location: 28394-29524 bp Feature: domain Description: Arm-DNA-bind_4 Location: 28433-28553 bp Feature: domain Description: Arm-DNA-bind_4 Location: 2843 3 -28553 bp Feature: domain Description: Phage_int_SAM_3 Location: 28601-28760 bp Feature: domain Description: Phage_int_SAM_3 Location: 28601-28760 bp Feature: domain Description: INT_ICEBs1_C_like Location: 28928-29468 bp Feature: domain Description: INT_ICEBs1_C_like Location: 28928-29468 bp Feature: gene Location: 30414-30590 bp Feature: gene Location: 30597-32132 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 31056-31455 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 3 1056-3 1455 bp Feature: gene Location: 32731-33279 bp Feature: domain Description: INT_C_like_3 Location: 32749-33256 bp Feature: domain Description: INT_C_like_3 Location: 3 2749-3 3 256 bp Feature: gene Location: 33627-33998 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_4 (pfam14657), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), RVT-UG15, INT_C_like_3 (cd01192)