myRT

myRT report for GCA_002552485.1_ASM255248v1

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Seq: NVMM01000016.1 Bacillus cereus strain AFS093833 AFS093833_105_C7_Contig16_140523, whole genome shotgun sequence (6251 bp)
Overview 1 RT 1: 1476-6060 bp Neighborhood of RT #1 [1476, 6140] HNHc RVT-GII RVT-GII DDE_Tnp_1_6 DUF772 DDE_Tnp_1 Feature: gene Location: 1476-1820 bp Feature: gene Location: 2102-2866 bp Feature: domain Description: HNHc Note: nucleases Location: 2588-2750 bp Feature: domain Description: HNHc Note: nucleases Location: 2588-2750 bp Feature: gene Location: 3024-3338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3033-3315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3033-331 5 bp Feature: gene Location: 3356-3835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3677-3791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3677-3791 bp Feature: gene Location: 5271-5414 bp Feature: domain Description: DDE_Tnp_1_6 Location: 5277-5403 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 5277-5403 bp Feature: gene Location: 5418-6140 bp Feature: domain Description: DUF772 Location: 5514-5706 bp Feature: domain Description: DUF772 Location: 551 4-5706 bp Feature: domain Description: DDE_Tnp_1 Location: 5760-6060 bp Feature: domain Description: DDE_Tnp_1 Location: 5760-6060 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HNHc (smart00507), RVT-GII, DDE_Tnp_1_6 (pfam13751), DUF772 (pfam05598), DDE_Tnp_1 (pfam01609)

Seq: NVMM01000026.1 Bacillus cereus strain AFS093833 AFS093833_105_C7_Contig26_140523, whole genome shotgun sequence (5122 bp)
Overview 1 RT 1: 1296-4946 bp Neighborhood of RT #1 [1296, 5119] Rve FieF RVT-GII Feature: gene Location: 1296-1427 bp Feature: domain Description: Rve Location: 1302-1419 bp Feature: domain Description: Rve Location: 1302 -1419 bp Feature: gene Location: 2002-2871 bp Feature: domain Description: FieF Location: 2011-2857 bp Feature: domain Description: FieF Location: 2 011-2 857 bp Feature: gene Location: 3956-5119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4253-4946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 53-4946 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), FieF (COG0053), RVT-GII

Seq: NVMM01000027.1 Bacillus cereus strain AFS093833 AFS093833_105_C7_Contig27_140523, whole genome shotgun sequence (6708 bp)
Overview 1 RT 1: 1-3249 bp Neighborhood of RT #1 [1, 3249] RVT-GII Feature: gene Location: 1-1167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 298-991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 298-991 bp Feature: gene Location: 1397-1546 bp Feature: gene Location: 3052-3249 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NVMM01000056.1 Bacillus cereus strain AFS093833 AFS093833_105_C7_Contig56_140523, whole genome shotgun sequence (37784 bp)
Overview 1 RT 1: 14017-23791 bp Neighborhood of RT #1 [14017, 23791] TraC-F-type RVT-GII HNHc TraC-F-type Feature: gene Location: 14017-18051 bp Feature: gene Location: 18082-19050 bp Feature: domain Description: TraC-F-type Location: 18109-18889 bp Feature: domain Description: TraC-F-type Location: 18109-18889 bp Feature: gene Location: 19342-21174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19642-20347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1964 2-2034 7 bp Feature: domain Description: HNHc Note: nucleases Location: 20926-21058 bp Feature: domain Description: HNHc Note: nucleases Location: 20926-21058 bp Feature: gene Location: 21903-22874 bp Feature: domain Description: TraC-F-type Location: 22323-22797 bp Feature: domain Description: TraC-F-type Location: 22323-22797 bp Feature: gene Location: 22877-23791 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), RVT-GII, HNHc (smart00507)

Seq: NVMM01000057.1 Bacillus cereus strain AFS093833 AFS093833_105_C7_Contig57_140523, whole genome shotgun sequence (13724 bp)
Overview 1 RT 1: 10503-13721 bp Neighborhood of RT #1 [10503, 13721] RhsA RVT-GII RVT-GII GIIM Feature: gene Location: 10503-11411 bp Feature: domain Description: RhsA Location: 10509-11250 bp Feature: domain Description: RhsA Location: 105 09-1125 0 bp Feature: gene Location: 11552-11869 bp Feature: gene Location: 12027-13283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12312-12639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12312-12639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12660-12861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12660-12861 bp Feature: domain Description: GIIM Note: maturase Location: 12936-13167 bp Feature: domain Description: GIIM Note: maturase Location: 12936-13167 bp Feature: gene Location: 13593-13721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RhsA (COG3209), RVT-GII, GIIM (pfam08388)

Seq: NVMM01000078.1 Bacillus cereus strain AFS093833 AFS093833_105_C7_Contig78_140523, whole genome shotgun sequence (10756 bp)
Overview 1 RT 1: 4509-10754 bp Neighborhood of RT #1 [4509, 10754] RVT-GII RVT-GII Intron_maturas2 RVT-GII Ftsk_gamma Feature: gene Location: 4509-4733 bp Feature: gene Location: 4769-5689 bp Feature: gene Location: 6420-7052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6690-7050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 6 90-7050 bp Feature: gene Location: 7110-8012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7209-7434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7209-7434 bp Feature: domain Description: Intron_maturas2 Location: 7518-7809 bp Feature: domain Description: Intron_maturas2 Location: 7518-7809 bp Feature: gene Location: 8158-8361 bp Feature: gene Location: 9034-9504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9334-9502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9334-9502 bp Feature: gene Location: 9837-10211 bp Feature: domain Description: Ftsk_gamma Location: 10008-10188 bp Feature: domain Description: Ftsk_gamma Location: 10008-10188 bp Feature: gene Location: 10479-10754 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), Ftsk_gamma (smart00843)