myRT

myRT report for GCA_002552625.1_ASM255262v1

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Seq: NVOR01000024.1 Bacillus pseudomycoides strain AFS092012 AFS092012_102_E3_Contig24_140514, whole genome shotgun sequence (62647 bp)
Overview 1 RT 1: 28342-33946 bp Neighborhood of RT #1 [28342, 33946] Arm-DNA-bind_4 Phage_int_SAM_3 INT_ICEBs1_C_like RVT-UG15 INT_C_like_3 Feature: gene Location: 28342-29472 bp Feature: domain Description: Arm-DNA-bind_4 Location: 28381-28501 bp Feature: domain Description: Arm-DNA-bind_4 Location: 28381 -28501 bp Feature: domain Description: Phage_int_SAM_3 Location: 28549-28708 bp Feature: domain Description: Phage_int_SAM_3 Location: 28549-28708 bp Feature: domain Description: INT_ICEBs1_C_like Location: 28876-29416 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 28876-2941 6 bp Feature: gene Location: 30362-30538 bp Feature: gene Location: 30545-32080 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 31004-31403 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 31 004-31 403 bp Feature: gene Location: 32679-33227 bp Feature: domain Description: INT_C_like_3 Location: 32697-33204 bp Feature: domain Description: INT_C_like_3 Location: 32697-33204 bp Feature: gene Location: 33575-33946 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_4 (pfam14657), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), RVT-UG15, INT_C_like_3 (cd01192)

Seq: NVOR01000065.1 Bacillus pseudomycoides strain AFS092012 AFS092012_102_E3_Contig65_140514, whole genome shotgun sequence (42808 bp)
Overview 1 RT 1: 15917-25990 bp Neighborhood of RT #1 [15917, 25998] addB_Gpos addA_Gpos RVT-GII Intron_maturas2 HNHc addA_Gpos gerPA Feature: gene Location: 15917-19432 bp Feature: domain Description: addB_Gpos Location: 15920-19427 bp Feature: domain Description: addB_Gpos Location: 1592 0-1942 7 bp Feature: gene Location: 19429-20781 bp Feature: domain Description: addA_Gpos Location: 19468-20773 bp Feature: domain Description: addA_Gpos Location: 19468-2 0773 bp Feature: gene Location: 21343-23184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21631-22462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1631-2 2 462 bp Feature: domain Description: Intron_maturas2 Location: 22636-22834 bp Feature: domain Description: Intron_maturas2 Location: 2 2 636-2 2 834 bp Feature: domain Description: HNHc Note: nucleases Location: 23008-23161 bp Feature: domain Description: HNHc Note: nucleases Location: 2 3008-2 3161 bp Feature: gene Location: 23373-25682 bp Feature: domain Description: addA_Gpos Location: 23376-25668 bp Feature: domain Description: addA_Gpos Location: 2 3376-2 5668 bp Feature: gene Location: 25777-25998 bp Feature: domain Description: gerPA Location: 25786-25990 bp Feature: domain Description: gerPA Location: 2 5786-2 5990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT addB_Gpos (TIGR02773), addA_Gpos (TIGR02785), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), gerPA (pfam10676)