myRT

myRT report for GCA_002553475.1_ASM255347v1

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Seq: PDCE01000057.1 Escherichia coli strain M15-4 NODE_57_length_25929_cov_4.299938, whole genome shotgun sequence (25929 bp)
Overview 1 RT 1: 187-4127 bp Neighborhood of RT #1 [187, 4127] PRK13889 RVT-UG16 Feature: gene Location: 187-1389 bp Feature: domain Description: PRK13889 Location: 190-793 bp Feature: domain Description: PRK1 3889 Location: 1 90-793 bp Feature: gene Location: 1343-1684 bp Feature: gene Location: 1817-3301 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 2180-2588 bp Feature: RT Description: RVT-UG1 6 Note: UG1 6 RT Location: 21 80-2588 bp Feature: gene Location: 3400-3963 bp Feature: gene Location: 3972-4127 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-UG16

Seq: PDCE01000069.1 Escherichia coli strain M15-4 NODE_69_length_18990_cov_3.519483, whole genome shotgun sequence (18990 bp)
Overview 1 RT 1: 9155-12794 bp Neighborhood of RT #1 [9155, 12961] InsE PHA02517 RVT-GII GIIM COG2085 Feature: gene Location: 9155-9457 bp Feature: domain Description: InsE Location: 9194-9443 bp Feature: domain Description: InsE Location: 9194-9443 bp Feature: gene Location: 9513-9938 bp Feature: domain Description: PHA02517 Location: 9537-9873 bp Feature: domain Description: PHA02 517 Location: 9537-9873 bp Feature: gene Location: 10530-12053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10803-11535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10803-11535 bp Feature: domain Description: GIIM Note: maturase Location: 11610-11808 bp Feature: domain Description: GIIM Note: maturase Location: 11610-11808 bp Feature: gene Location: 12248-12382 bp Feature: gene Location: 12548-12961 bp Feature: domain Description: COG2085 Location: 12647-12794 bp Feature: domain Description: COG2 085 Location: 12 647-12 794 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG2085 (Predicted dinucleotide-binding enzyme )