myRT

myRT report for GCA_002553835.1_ASM255383v1

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Seq: PCYW01000100.1 Lactobacillus sp. UMNPBX14 NODE_100_length_1934_cov_600.176, whole genome shotgun sequence (1934 bp)
Overview 1 RT 1: 66-1152 bp Neighborhood of RT #1 [66, 1376] RVT-GII GIIM Feature: gene Location: 66-1376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 267-885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 267-885 bp Feature: domain Description: GIIM Note: maturase Location: 939-1152 bp Feature: domain Description: GIIM Note: maturase Location: 939-1 1 52 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PCYW01000122.1 Lactobacillus sp. UMNPBX14 NODE_122_length_954_cov_29.1858, whole genome shotgun sequence (954 bp)
Overview 1 RT 1: 33-225 bp Neighborhood of RT #1 [33, 881] RVT-UNC Feature: gene Location: 33-881 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 48-225 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 48-2 2 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12/RVT-UG13/RVT-UG8/RVT-UG5(RVT-UNC)

Seq: PCYW01000041.1 Lactobacillus sp. UMNPBX14 NODE_41_length_15110_cov_104.745, whole genome shotgun sequence (15110 bp)
Overview 1 RT 1: 50-2812 bp Neighborhood of RT #1 [50, 2850] RVT-UNC Abi_C RmlD_sub_bind Feature: gene Location: 50-751 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 530-740 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 53 0-740 bp Feature: gene Location: 769-1698 bp Feature: domain Description: Abi_C Location: 1459-1681 bp Feature: domain Description: Abi_C Location: 1459-1681 bp Feature: gene Location: 1864-2850 bp Feature: domain Description: RmlD_sub_bind Location: 1867-2812 bp Feature: domain Description: RmlD_sub_bind Location: 1867-2812 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12/RVT-AbiK/RVT-AbiP2/RVT-UG14(RVT-UNC), Abi_C (pfam14355), RmlD_sub_bind (pfam04321)